Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03898

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
4,366,002	-				+0.5
4,366,007	-				-0.3
4,366,012	-				-0.3
4,366,103	-		MIT1002_03897	0.16	-0.3
4,366,196	-		MIT1002_03897	0.27	+0.3
4,366,293	-		MIT1002_03897	0.39	-1.6
4,366,390	-		MIT1002_03897	0.51	+0.9
4,366,390	-		MIT1002_03897	0.51	-0.3
4,366,390	-		MIT1002_03897	0.51	-2.0
4,366,390	-		MIT1002_03897	0.51	-0.2
4,366,508	-		MIT1002_03897	0.66	+1.8
4,366,605	-		MIT1002_03897	0.78	+1.4
4,366,764	-				-1.4
4,366,863	-				-1.1
4,367,049	+				+1.7
4,367,096	-		MIT1002_03898	0.11	-1.5
4,367,097	+		MIT1002_03898	0.11	-1.4
4,367,105	-		MIT1002_03898	0.12	-0.3
4,367,135	+		MIT1002_03898	0.15	-3.3
4,367,226	+		MIT1002_03898	0.23	+1.2
4,367,226	+		MIT1002_03898	0.23	+0.8
4,367,241	+		MIT1002_03898	0.25	-0.6
4,367,241	+		MIT1002_03898	0.25	+0.8
4,367,249	-		MIT1002_03898	0.26	-0.0
4,367,249	-		MIT1002_03898	0.26	+0.4
4,367,278	+		MIT1002_03898	0.28	+0.5
4,367,281	-		MIT1002_03898	0.29	-0.1
4,367,387	+		MIT1002_03898	0.39	-0.4
4,367,414	+		MIT1002_03898	0.41	+2.4
4,367,430	+		MIT1002_03898	0.43	+0.9
4,367,431	+		MIT1002_03898	0.43	-0.2
4,367,432	+		MIT1002_03898	0.43	+0.1
4,367,553	+		MIT1002_03898	0.55	-0.7
4,367,561	-		MIT1002_03898	0.56	+0.6
4,367,674	+		MIT1002_03898	0.66	+1.4
4,367,682	-		MIT1002_03898	0.67	+0.1
4,367,707	-		MIT1002_03898	0.70	-0.5
4,367,718	-		MIT1002_03898	0.71	-0.2
4,367,720	+		MIT1002_03898	0.71	+0.8
4,367,871	+		MIT1002_03898	0.85	-0.6
4,367,879	+		MIT1002_03898	0.86	-0.3
4,367,889	+		MIT1002_03898	0.87	+0.5
4,367,889	+		MIT1002_03898	0.87	-1.1
4,367,889	+		MIT1002_03898	0.87	-0.5
4,367,889	+		MIT1002_03898	0.87	-0.7
4,367,889	+		MIT1002_03898	0.87	-1.3
4,367,889	+		MIT1002_03898	0.87	-0.0
4,367,897	-		MIT1002_03898	0.88	-1.2
4,367,897	-		MIT1002_03898	0.88	+1.4
4,367,897	-		MIT1002_03898	0.88	-2.0
4,367,897	-		MIT1002_03898	0.88	-1.4
4,367,897	-		MIT1002_03898	0.88	+0.7
4,367,897	-		MIT1002_03898	0.88	+1.0
4,367,897	-		MIT1002_03898	0.88	-1.2
4,367,925	+				-1.0
4,367,933	+				-1.9
4,367,941	-				-0.6
4,368,003	+				-1.3
4,368,102	-				-2.8
4,368,102	-				+1.1
4,368,102	-				+0.3
4,368,104	+				+1.0
4,368,162	-				+0.4
4,368,225	-				-0.2
4,368,239	+				-0.3