Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03849

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
4,310,899	+		MIT1002_03848	0.21	-1.6
4,310,907	-		MIT1002_03848	0.22	-0.9
4,310,907	-		MIT1002_03848	0.22	+0.4
4,310,964	+		MIT1002_03848	0.27	+0.3
4,310,964	+		MIT1002_03848	0.27	+0.6
4,310,964	+		MIT1002_03848	0.27	-1.5
4,310,964	+		MIT1002_03848	0.27	-1.2
4,310,964	+		MIT1002_03848	0.27	-0.7
4,310,972	-		MIT1002_03848	0.27	-0.9
4,310,972	-		MIT1002_03848	0.27	+0.8
4,310,972	-		MIT1002_03848	0.27	-1.0
4,310,972	-		MIT1002_03848	0.27	+1.0
4,310,972	-		MIT1002_03848	0.27	-2.5
4,310,975	+		MIT1002_03848	0.28	+0.2
4,310,977	+		MIT1002_03848	0.28	-0.2
4,310,985	+		MIT1002_03848	0.28	+0.3
4,311,019	+		MIT1002_03848	0.31	-0.6
4,311,032	+		MIT1002_03848	0.33	-0.3
4,311,040	-		MIT1002_03848	0.33	-0.3
4,311,133	+		MIT1002_03848	0.42	+0.4
4,311,158	+		MIT1002_03848	0.44	-0.2
4,311,166	-		MIT1002_03848	0.44	-0.8
4,311,173	+		MIT1002_03848	0.45	-1.0
4,311,182	-		MIT1002_03848	0.46	-1.2
4,311,187	-		MIT1002_03848	0.46	-0.1
4,311,188	+		MIT1002_03848	0.46	-0.0
4,311,204	+		MIT1002_03848	0.48	-1.1
4,311,258	-		MIT1002_03848	0.53	-0.9
4,311,280	+		MIT1002_03848	0.54	-1.3
4,311,280	+		MIT1002_03848	0.54	+0.1
4,311,288	-		MIT1002_03848	0.55	-0.6
4,311,410	+		MIT1002_03848	0.66	-2.7
4,311,410	+		MIT1002_03848	0.66	+0.1
4,311,410	+		MIT1002_03848	0.66	+0.4
4,311,446	+		MIT1002_03848	0.69	-0.2
4,311,453	+		MIT1002_03848	0.70	-1.1
4,311,454	-		MIT1002_03848	0.70	-0.8
4,311,454	-		MIT1002_03848	0.70	-1.0
4,311,460	+		MIT1002_03848	0.70	-1.1
4,311,482	+		MIT1002_03848	0.72	-1.0
4,311,482	+		MIT1002_03848	0.72	-0.1
4,311,482	+		MIT1002_03848	0.72	-1.4
4,311,490	-		MIT1002_03848	0.73	-0.7
4,311,566	-		MIT1002_03848	0.80	-0.5
4,311,693	-				+2.3
4,311,693	-				-0.2
4,311,695	+				-1.3
4,311,695	+				+0.4
4,311,703	-				-2.3
4,311,772	+				+0.6
4,311,780	-				+1.3
4,311,790	-				-0.2
4,311,807	-				+0.4
4,311,821	-				+0.8
4,311,848	-				-1.0
4,311,856	-				+0.1
4,311,865	+				-0.6
4,311,909	+				-0.5
4,311,926	+				+1.2
4,311,933	+				-0.7
4,311,943	+				-3.3
4,311,951	-				-0.3
4,311,983	-		MIT1002_03849	0.12	+0.3
4,312,031	+		MIT1002_03849	0.15	-3.1
4,312,039	-		MIT1002_03849	0.15	+0.6
4,312,068	+		MIT1002_03849	0.17	-0.6
4,312,086	+		MIT1002_03849	0.18	+0.8
4,312,098	+		MIT1002_03849	0.19	-0.3
4,312,132	+		MIT1002_03849	0.21	-0.1
4,312,140	-		MIT1002_03849	0.22	-0.3
4,312,140	-		MIT1002_03849	0.22	+0.1
4,312,140	-		MIT1002_03849	0.22	-0.3
4,312,142	+		MIT1002_03849	0.22	-1.1
4,312,206	+		MIT1002_03849	0.26	+0.5
4,312,206	+		MIT1002_03849	0.26	+0.2
4,312,243	-		MIT1002_03849	0.28	+2.1
4,312,243	-		MIT1002_03849	0.28	-0.7
4,312,297	+		MIT1002_03849	0.32	-0.9
4,312,304	-		MIT1002_03849	0.32	-2.1
4,312,306	+		MIT1002_03849	0.32	-0.8
4,312,309	-		MIT1002_03849	0.33	-2.6
4,312,311	+		MIT1002_03849	0.33	-0.3
4,312,315	+		MIT1002_03849	0.33	-1.5
4,312,360	-		MIT1002_03849	0.36	+0.7
4,312,401	-		MIT1002_03849	0.38	-1.0
4,312,447	+		MIT1002_03849	0.41	-0.2
4,312,553	+		MIT1002_03849	0.48	-0.4
4,312,559	-		MIT1002_03849	0.48	-0.4
4,312,639	+		MIT1002_03849	0.53	+0.5
4,312,640	-		MIT1002_03849	0.54	-0.6
4,312,678	+		MIT1002_03849	0.56	-1.4
4,312,699	-		MIT1002_03849	0.57	-0.3
4,312,753	+		MIT1002_03849	0.61	-1.4
4,312,793	+		MIT1002_03849	0.63	+0.1
4,312,801	-		MIT1002_03849	0.64	-1.7
4,312,801	-		MIT1002_03849	0.64	-0.8
4,312,821	+		MIT1002_03849	0.65	-0.7
4,312,821	+		MIT1002_03849	0.65	+0.8
4,312,831	+		MIT1002_03849	0.66	+2.2
4,312,839	-		MIT1002_03849	0.66	+0.2
4,312,915	+		MIT1002_03849	0.71	+0.6
4,312,958	+		MIT1002_03849	0.74	+1.0
4,313,045	+		MIT1002_03849	0.79	-1.8
4,313,045	+		MIT1002_03849	0.79	-0.1
4,313,053	-		MIT1002_03849	0.80	+0.0
4,313,072	+		MIT1002_03849	0.81	-0.5
4,313,156	+		MIT1002_03849	0.86	+1.3
4,313,156	+		MIT1002_03849	0.86	-2.4
4,313,164	-		MIT1002_03849	0.87	-0.0
4,313,164	-		MIT1002_03849	0.87	-0.3
4,313,164	-		MIT1002_03849	0.87	-1.0
4,313,275	+				-1.2
4,313,356	+				-1.7
4,313,377	-				+0.6
4,313,416	+				+0.5
4,313,710	+				+0.8
4,313,710	+				-0.8
4,313,710	+				+0.8
4,313,710	+				+0.1
4,313,710	+				+1.4
4,313,710	+				-0.4
4,313,710	+				-0.1
4,313,710	+				-0.3
4,313,710	+				+1.0
4,313,716	-				+1.2
4,313,718	-				-0.2
4,313,718	-				-1.2
4,313,718	-				+0.0
4,313,718	-				-2.3
4,313,718	-				+0.1
4,313,720	+				-0.6
4,313,720	-				+0.6
4,313,788	-		MIT1002_03850	0.14	-0.3
4,313,816	-		MIT1002_03850	0.19	-1.4
4,313,821	-		MIT1002_03850	0.19	-1.0
4,313,833	+		MIT1002_03850	0.21	-1.5
4,313,841	-		MIT1002_03850	0.23	+0.8
4,313,841	-		MIT1002_03850	0.23	+0.7
4,313,941	+		MIT1002_03850	0.39	+0.9
4,313,981	-		MIT1002_03850	0.46	+2.4
4,314,026	+		MIT1002_03850	0.53	+1.5
4,314,107	+		MIT1002_03850	0.67	-1.8
4,314,115	-		MIT1002_03850	0.68	-1.3
4,314,130	+		MIT1002_03850	0.70	+0.2
4,314,198	+		MIT1002_03850	0.82	-0.9
4,314,241	+		MIT1002_03850	0.89	+0.6
4,314,262	+				+0.5
4,314,368	-				+0.3