Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03610

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
4,032,473	-				-0.7
4,032,473	-				-2.5
4,032,473	-				+2.1
4,032,491	+				-0.4
4,032,504	-				-1.2
4,032,538	-				+0.6
4,032,551	+				+0.4
4,032,551	+				-1.3
4,032,552	-				-1.7
4,032,559	-				-0.6
4,032,559	-				+0.1
4,032,559	-				-0.2
4,032,591	+				+0.1
4,032,592	+				-0.6
4,032,594	-				+1.4
4,032,599	-				+0.3
4,032,600	-				+0.1
4,032,628	-				-0.2
4,032,628	-				-0.5
4,032,668	-				-0.1
4,032,696	+				-0.6
4,032,704	-				+1.3
4,032,710	-				-0.9
4,032,845	-		MIT1002_03608	0.53	+0.8
4,032,845	-		MIT1002_03608	0.53	-0.7
4,032,855	-		MIT1002_03608	0.56	-0.3
4,032,901	+		MIT1002_03608	0.71	+0.1
4,033,127	+		MIT1002_03609	0.65	-0.6
4,033,166	+		MIT1002_03609	0.80	-0.4
4,033,262	+				-0.8
4,033,262	+				-1.3
4,033,309	+				-0.4
4,033,310	-				-0.6
4,033,385	+				+0.1
4,033,395	+				+0.7
4,033,395	+				-0.6
4,033,431	+				+0.4
4,033,439	-				+1.4
4,033,439	-				-2.6
4,033,470	+				-0.4
4,033,470	+				-0.1
4,033,478	-				-1.8
4,033,501	+				-1.2
4,033,526	+				+0.2
4,033,534	-				+0.7
4,033,597	-				+1.1
4,033,652	+				-0.5
4,033,660	-				+0.9
4,033,691	-		MIT1002_03610	0.10	+0.3
4,033,705	-		MIT1002_03610	0.11	+0.0
4,033,719	+		MIT1002_03610	0.12	+0.2
4,033,727	-		MIT1002_03610	0.12	+1.7
4,033,727	-		MIT1002_03610	0.12	+1.6
4,033,796	-		MIT1002_03610	0.15	-1.7
4,033,823	+		MIT1002_03610	0.16	-0.0
4,033,826	+		MIT1002_03610	0.16	+1.9
4,033,831	-		MIT1002_03610	0.16	-0.3
4,033,898	-		MIT1002_03610	0.19	+1.4
4,033,925	+		MIT1002_03610	0.20	-0.1
4,033,946	+		MIT1002_03610	0.21	+0.7
4,033,953	+		MIT1002_03610	0.21	-0.5
4,033,954	-		MIT1002_03610	0.21	+0.7
4,033,960	+		MIT1002_03610	0.22	+0.0
4,033,961	-		MIT1002_03610	0.22	-1.7
4,034,013	-		MIT1002_03610	0.24	-0.6
4,034,031	+		MIT1002_03610	0.25	-0.4
4,034,034	-		MIT1002_03610	0.25	-1.0
4,034,075	+		MIT1002_03610	0.27	+0.2
4,034,091	+		MIT1002_03610	0.27	+0.5
4,034,091	+		MIT1002_03610	0.27	+0.5
4,034,099	-		MIT1002_03610	0.28	+1.8
4,034,099	-		MIT1002_03610	0.28	+3.0
4,034,099	-		MIT1002_03610	0.28	+3.2
4,034,099	-		MIT1002_03610	0.28	-0.4
4,034,131	-		MIT1002_03610	0.29	+1.4
4,034,158	-		MIT1002_03610	0.30	-0.9
4,034,158	-		MIT1002_03610	0.30	+0.2
4,034,165	-		MIT1002_03610	0.30	-0.0
4,034,255	-		MIT1002_03610	0.34	-2.5
4,034,293	+		MIT1002_03610	0.36	+0.4
4,034,296	-		MIT1002_03610	0.36	+0.5
4,034,296	-		MIT1002_03610	0.36	-1.0
4,034,419	+		MIT1002_03610	0.41	+0.2
4,034,449	-		MIT1002_03610	0.42	+0.5
4,034,530	+		MIT1002_03610	0.46	-1.1
4,034,538	-		MIT1002_03610	0.46	+0.3
4,034,540	+		MIT1002_03610	0.46	-0.4
4,034,548	-		MIT1002_03610	0.47	+0.8
4,034,548	-		MIT1002_03610	0.47	-0.4
4,034,548	-		MIT1002_03610	0.47	-0.9
4,034,550	+		MIT1002_03610	0.47	-0.1
4,034,550	+		MIT1002_03610	0.47	+0.9
4,034,593	-		MIT1002_03610	0.48	-0.2
4,034,595	+		MIT1002_03610	0.49	-1.4
4,034,603	-		MIT1002_03610	0.49	-1.3
4,034,676	-		MIT1002_03610	0.52	+1.3
4,034,693	+		MIT1002_03610	0.53	-0.3
4,034,693	+		MIT1002_03610	0.53	+1.1
4,034,701	-		MIT1002_03610	0.53	+0.2
4,034,701	-		MIT1002_03610	0.53	-4.6
4,034,701	-		MIT1002_03610	0.53	-1.1
4,034,780	+		MIT1002_03610	0.56	-0.6
4,034,780	-		MIT1002_03610	0.56	-0.1
4,034,805	-		MIT1002_03610	0.57	-2.1
4,034,849	+		MIT1002_03610	0.59	-0.2
4,034,903	+		MIT1002_03610	0.62	+0.7
4,034,909	+		MIT1002_03610	0.62	+0.2
4,034,977	+		MIT1002_03610	0.65	-0.0
4,034,979	+		MIT1002_03610	0.65	+0.5
4,034,985	-		MIT1002_03610	0.65	+0.0
4,034,985	-		MIT1002_03610	0.65	+0.9
4,035,029	+		MIT1002_03610	0.67	+1.4
4,035,254	+		MIT1002_03610	0.76	-0.5
4,035,266	+		MIT1002_03610	0.77	-0.1
4,035,268	-		MIT1002_03610	0.77	+2.6
4,035,275	-		MIT1002_03610	0.77	+0.2
4,035,300	+		MIT1002_03610	0.78	-3.1
4,035,306	+		MIT1002_03610	0.79	-0.1
4,035,331	-		MIT1002_03610	0.80	+1.5
4,035,362	-		MIT1002_03610	0.81	-0.8
4,035,434	-		MIT1002_03610	0.84	-0.4
4,035,501	+		MIT1002_03610	0.87	+0.3
4,035,518	+		MIT1002_03610	0.88	+0.3
4,035,656	-				+0.3
4,035,678	+				-0.2
4,035,678	+				-2.9
4,035,686	-				-0.9
4,035,686	-				-2.6
4,035,686	-				-0.8
4,035,780	+				+0.2
4,035,961	+				+0.8
4,035,985	+				+0.7
4,036,005	+				+0.7
4,036,023	-				+0.3
4,036,023	-				-0.8
4,036,023	-				+0.6
4,036,038	+				+0.1
4,036,067	-				+0.6
4,036,176	-		MIT1002_03611	0.17	+0.6
4,036,187	+		MIT1002_03611	0.21	-0.4
4,036,187	+		MIT1002_03611	0.21	-0.6
4,036,187	+		MIT1002_03611	0.21	-0.5
4,036,195	-		MIT1002_03611	0.23	-0.4
4,036,195	-		MIT1002_03611	0.23	+1.0
4,036,199	+		MIT1002_03611	0.25	+1.1
4,036,200	-		MIT1002_03611	0.25	+1.5
4,036,204	+		MIT1002_03611	0.27	-0.9
4,036,204	+		MIT1002_03611	0.27	-2.3
4,036,204	+		MIT1002_03611	0.27	-0.2
4,036,209	+		MIT1002_03611	0.28	-1.0
4,036,209	+		MIT1002_03611	0.28	-0.6
4,036,209	+		MIT1002_03611	0.28	-0.1
4,036,209	+		MIT1002_03611	0.28	+1.2
4,036,209	+		MIT1002_03611	0.28	+0.7
4,036,209	+		MIT1002_03611	0.28	-0.6
4,036,209	+		MIT1002_03611	0.28	-1.0
4,036,209	+		MIT1002_03611	0.28	+0.8
4,036,209	+		MIT1002_03611	0.28	-0.9
4,036,209	+		MIT1002_03611	0.28	+0.8
4,036,209	+		MIT1002_03611	0.28	+0.6
4,036,209	+		MIT1002_03611	0.28	-0.2
4,036,217	-		MIT1002_03611	0.31	-0.6
4,036,217	-		MIT1002_03611	0.31	-1.5
4,036,217	-		MIT1002_03611	0.31	+0.4
4,036,217	-		MIT1002_03611	0.31	-1.0
4,036,217	-		MIT1002_03611	0.31	-0.6
4,036,217	-		MIT1002_03611	0.31	+0.8
4,036,217	-		MIT1002_03611	0.31	-0.1
4,036,217	-		MIT1002_03611	0.31	-0.6
4,036,217	-		MIT1002_03611	0.31	-0.4
4,036,217	-		MIT1002_03611	0.31	-0.4
4,036,306	+		MIT1002_03611	0.63	+0.2
4,036,306	+		MIT1002_03611	0.63	-2.3
4,036,314	-		MIT1002_03611	0.66	+1.7
4,036,367	-		MIT1002_03611	0.84	-0.6
4,036,480	-				+0.3
4,036,496	-				+0.5
4,036,496	-				-1.2
4,036,529	-				-1.5
4,036,548	-				+0.9
4,036,553	+				-0.2
4,036,553	+				-1.6
4,036,561	-				-1.0
4,036,702	-		MIT1002_03612	0.34	-0.8
4,036,731	+		MIT1002_03612	0.39	+1.2
4,036,739	-		MIT1002_03612	0.40	+0.3
4,036,743	-		MIT1002_03612	0.41	-0.8