Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03256

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
3,627,840	+		MIT1002_03255	0.19	+0.9
3,627,924	+		MIT1002_03255	0.27	-0.2
3,627,932	+		MIT1002_03255	0.28	-2.4
3,627,932	+		MIT1002_03255	0.28	-0.0
3,627,932	+		MIT1002_03255	0.28	-0.6
3,627,932	+		MIT1002_03255	0.28	-0.3
3,627,940	+		MIT1002_03255	0.29	+0.6
3,627,969	+		MIT1002_03255	0.31	-1.5
3,627,977	-		MIT1002_03255	0.32	+1.0
3,628,032	-		MIT1002_03255	0.38	+1.2
3,628,032	-		MIT1002_03255	0.38	-0.4
3,628,032	-		MIT1002_03255	0.38	+0.1
3,628,032	-		MIT1002_03255	0.38	-0.3
3,628,057	+		MIT1002_03255	0.40	+0.2
3,628,111	-		MIT1002_03255	0.45	-0.5
3,628,183	+		MIT1002_03255	0.53	+0.2
3,628,191	-		MIT1002_03255	0.53	+2.1
3,628,220	+		MIT1002_03255	0.56	-1.2
3,628,260	+		MIT1002_03255	0.60	-0.2
3,628,260	+		MIT1002_03255	0.60	+0.7
3,628,260	+		MIT1002_03255	0.60	-0.7
3,628,295	-		MIT1002_03255	0.64	+0.0
3,628,318	-		MIT1002_03255	0.66	-1.0
3,628,406	+		MIT1002_03255	0.75	-0.2
3,628,421	+		MIT1002_03255	0.76	-0.7
3,628,421	+		MIT1002_03255	0.76	-0.2
3,628,486	-		MIT1002_03255	0.83	-0.5
3,628,486	-		MIT1002_03255	0.83	-0.6
3,628,519	+		MIT1002_03255	0.86	-0.5
3,628,520	+		MIT1002_03255	0.86	+1.2
3,628,527	-		MIT1002_03255	0.87	-0.3
3,628,527	-		MIT1002_03255	0.87	-0.0
3,628,585	+				+0.2
3,628,595	+				-2.8
3,628,618	+				+0.0
3,628,674	+				+1.0
3,628,750	+				-0.2
3,628,782	-				+1.6
3,628,811	-				+0.5
3,628,819	+				+2.2
3,628,819	+				+0.0
3,628,819	+				+2.9
3,628,819	+				-0.3
3,628,819	+				+1.7
3,628,827	-				-2.0
3,628,837	-				-0.6
3,628,837	-				+1.7
3,628,874	+				-1.0
3,628,874	+				-1.3
3,628,882	-				+0.8
3,628,882	-				+1.0
3,628,934	+		MIT1002_03256	0.16	+0.6
3,628,934	+		MIT1002_03256	0.16	-0.6
3,628,942	-		MIT1002_03256	0.17	-1.9
3,628,942	-		MIT1002_03256	0.17	-0.6
3,628,942	-		MIT1002_03256	0.17	+0.4
3,628,950	-		MIT1002_03256	0.18	-0.5
3,628,976	+		MIT1002_03256	0.22	+0.0
3,628,988	+		MIT1002_03256	0.23	+0.9
3,628,996	-		MIT1002_03256	0.24	-2.5
3,628,996	-		MIT1002_03256	0.24	+0.1
3,629,023	+		MIT1002_03256	0.28	-0.2
3,629,042	-		MIT1002_03256	0.31	+0.5
3,629,077	+		MIT1002_03256	0.35	+2.5
3,629,094	-		MIT1002_03256	0.38	-1.8
3,629,149	-		MIT1002_03256	0.45	+0.7
3,629,187	-		MIT1002_03256	0.50	+1.4
3,629,194	+		MIT1002_03256	0.51	+0.1
3,629,194	+		MIT1002_03256	0.51	+0.1
3,629,194	+		MIT1002_03256	0.51	-0.6
3,629,202	-		MIT1002_03256	0.52	+0.4
3,629,203	-		MIT1002_03256	0.52	-2.3
3,629,213	+		MIT1002_03256	0.54	-2.7
3,629,213	+		MIT1002_03256	0.54	-0.3
3,629,213	+		MIT1002_03256	0.54	-0.2
3,629,222	-		MIT1002_03256	0.55	+0.4
3,629,351	+		MIT1002_03256	0.72	-1.4
3,629,359	-		MIT1002_03256	0.73	-0.6
3,629,361	+		MIT1002_03256	0.73	-0.6
3,629,462	-		MIT1002_03256	0.87	-0.4
3,629,479	+		MIT1002_03256	0.89	+1.9
3,629,544	+				+1.0
3,629,617	-				+0.5
3,629,620	+				+0.9
3,629,750	+		MIT1002_03257	0.21	-0.1
3,629,750	+		MIT1002_03257	0.21	+0.1
3,629,750	+		MIT1002_03257	0.21	-1.6
3,629,758	-		MIT1002_03257	0.22	-0.2
3,629,758	-		MIT1002_03257	0.22	+0.1
3,629,782	+		MIT1002_03257	0.26	-0.4
3,629,838	-		MIT1002_03257	0.33	+0.4
3,629,889	-		MIT1002_03257	0.39	-0.7
3,629,893	+		MIT1002_03257	0.40	+0.4
3,629,893	+		MIT1002_03257	0.40	-0.8
3,629,981	+		MIT1002_03257	0.51	-2.1
3,629,989	-		MIT1002_03257	0.52	+0.1
3,629,992	+		MIT1002_03257	0.52	-0.2
3,630,125	+		MIT1002_03257	0.69	+0.4
3,630,146	-		MIT1002_03257	0.72	-0.6
3,630,152	+		MIT1002_03257	0.73	+0.3
3,630,160	-		MIT1002_03257	0.74	+0.9
3,630,213	+		MIT1002_03257	0.81	-0.7
3,630,213	+		MIT1002_03257	0.81	+0.1
3,630,247	+		MIT1002_03257	0.85	-0.3
3,630,255	-		MIT1002_03257	0.86	+1.0
3,630,349	+				+0.3
3,630,354	+				-0.2
3,630,354	+				+1.1
3,630,362	-				-0.9
3,630,362	-				-0.5
3,630,403	+				-1.3
3,630,413	-				+0.4
3,630,484	-				-0.3
3,630,542	+				-0.2
3,630,544	+				-0.6
3,630,552	-				-0.3
3,630,558	-				+0.3