Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03237

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
3,604,774	-				+0.1
3,604,791	-				-0.1
3,604,896	+		MIT1002_03236	0.17	-1.6
3,604,912	-		MIT1002_03236	0.19	+0.7
3,604,983	-		MIT1002_03236	0.28	+1.2
3,605,025	-		MIT1002_03236	0.33	-0.8
3,605,029	+		MIT1002_03236	0.33	-0.6
3,605,039	+		MIT1002_03236	0.35	-0.5
3,605,086	-		MIT1002_03236	0.40	+0.3
3,605,193	-		MIT1002_03236	0.54	-0.6
3,605,394	+		MIT1002_03236	0.78	+1.2
3,605,517	+				+1.2
3,605,578	-				-0.8
3,605,588	+				+0.9
3,605,588	+				+0.2
3,605,596	-				+0.1
3,605,625	-				+0.2
3,605,679	-				+0.4
3,605,681	+				-0.9
3,605,681	+				+2.1
3,605,689	-				+0.5
3,605,697	+				-1.9
3,605,711	+				+0.7
3,605,733	-				-0.1
3,605,735	+				-1.3
3,605,775	-				+1.9
3,605,780	+				+1.6
3,605,785	+				+0.2
3,605,788	-				-1.5
3,605,793	-				-0.6
3,605,833	+				+0.2
3,605,841	-		MIT1002_03237	0.11	-1.0
3,605,877	-		MIT1002_03237	0.17	-1.9
3,606,068	+		MIT1002_03237	0.47	-0.6
3,606,068	+		MIT1002_03237	0.47	+1.4
3,606,120	-		MIT1002_03237	0.55	+0.7
3,606,223	-		MIT1002_03237	0.71	-0.8
3,606,233	+		MIT1002_03237	0.73	-0.9
3,606,238	+		MIT1002_03237	0.74	-1.2
3,606,248	+		MIT1002_03237	0.75	-0.0
3,606,249	-		MIT1002_03237	0.75	-0.2
3,606,251	+		MIT1002_03237	0.76	-1.7
3,606,251	+		MIT1002_03237	0.76	-0.5
3,606,251	+		MIT1002_03237	0.76	+1.2
3,606,251	+		MIT1002_03237	0.76	-0.1
3,606,251	+		MIT1002_03237	0.76	+0.1
3,606,256	-		MIT1002_03237	0.76	+0.9
3,606,259	-		MIT1002_03237	0.77	-0.3
3,606,259	-		MIT1002_03237	0.77	+0.5
3,606,259	-		MIT1002_03237	0.77	+0.6
3,606,259	-		MIT1002_03237	0.77	-0.3
3,606,259	-		MIT1002_03237	0.77	-1.3
3,606,261	+		MIT1002_03237	0.77	+0.7
3,606,261	+		MIT1002_03237	0.77	-0.1
3,606,261	+		MIT1002_03237	0.77	+0.4
3,606,261	+		MIT1002_03237	0.77	-1.5
3,606,261	+		MIT1002_03237	0.77	+1.1
3,606,269	-		MIT1002_03237	0.79	-0.7
3,606,269	-		MIT1002_03237	0.79	+1.6
3,606,269	-		MIT1002_03237	0.79	-1.7
3,606,269	-		MIT1002_03237	0.79	-0.3
3,606,269	-		MIT1002_03237	0.79	-0.8
3,606,269	-		MIT1002_03237	0.79	+0.2
3,606,269	-		MIT1002_03237	0.79	-0.0
3,606,281	-		MIT1002_03237	0.80	+0.4
3,606,309	+		MIT1002_03237	0.85	+1.1
3,606,324	-		MIT1002_03237	0.87	+0.2
3,606,413	-				-0.2
3,606,512	-				+2.0
3,606,526	+				+0.1
3,606,526	+				+0.4
3,606,526	+				-1.1
3,606,526	+				+1.2
3,606,526	+				-0.3
3,606,526	+				+1.1
3,606,526	+				+0.2
3,606,526	+				+0.1
3,606,526	+				+0.9
3,606,526	+				-0.5
3,606,526	+				+0.3
3,606,526	+				+0.5
3,606,526	+				-1.1
3,606,526	+				-0.8
3,606,534	-				+0.3
3,606,534	-				-0.4
3,606,534	-				-1.0
3,606,534	-				+0.7
3,606,534	-				+0.9
3,606,536	+				-1.5
3,606,536	+				+0.8
3,606,536	+				+1.2
3,606,536	+				+0.9
3,606,544	-				-1.5
3,606,544	-				+1.2
3,606,719	-		MIT1002_03238	0.42	-0.9
3,606,733	+		MIT1002_03238	0.51	+0.2
3,606,782	-		MIT1002_03238	0.85	-3.1
3,606,792	-				-1.7
3,606,877	+				-2.1
3,606,884	+				-2.0
3,606,892	+				-0.5
3,606,892	+				+1.1
3,606,900	+				+0.1
3,606,900	-				+0.4
3,606,901	+				-0.6
3,607,109	+				+0.1
3,607,117	-				-0.8
3,607,170	+				-0.9
3,607,196	+				-0.6
3,607,203	-				-0.4
3,607,215	+				-0.9
3,607,257	-				+1.4
3,607,284	-				+1.8
3,607,295	+				+1.3
3,607,303	-				-0.7
3,607,319	+				+1.0