Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03133

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
3,487,959	-		MIT1002_03132	0.67	+1.0
3,488,342	+				-0.9
3,488,350	-				-1.2
3,488,410	+				+1.9
3,488,464	+				-0.1
3,488,477	-				+1.4
3,488,485	-				+0.5
3,488,493	+				+0.2
3,488,493	+				-0.8
3,488,493	+				-1.3
3,488,501	-				-0.1
3,488,503	+				+0.4
3,488,511	-				-0.1
3,488,598	+				+0.6
3,488,635	+		MIT1002_03133	0.13	+0.5
3,488,635	+		MIT1002_03133	0.13	-0.6
3,488,635	+		MIT1002_03133	0.13	+1.3
3,488,642	-		MIT1002_03133	0.13	+0.5
3,488,643	-		MIT1002_03133	0.13	-0.7
3,488,701	-		MIT1002_03133	0.18	-0.0
3,488,773	-		MIT1002_03133	0.24	-2.9
3,488,814	+		MIT1002_03133	0.27	-2.7
3,488,886	-		MIT1002_03133	0.33	+0.2
3,488,941	+		MIT1002_03133	0.37	+0.7
3,488,949	-		MIT1002_03133	0.38	-0.2
3,489,030	-		MIT1002_03133	0.44	-1.9
3,489,030	-		MIT1002_03133	0.44	+1.3
3,489,032	+		MIT1002_03133	0.44	-1.6
3,489,032	+		MIT1002_03133	0.44	-0.5
3,489,032	+		MIT1002_03133	0.44	+0.3
3,489,032	+		MIT1002_03133	0.44	-0.7
3,489,032	+		MIT1002_03133	0.44	-0.2
3,489,040	-		MIT1002_03133	0.45	-0.8
3,489,105	-		MIT1002_03133	0.50	+0.1
3,489,241	+		MIT1002_03133	0.61	+0.5
3,489,338	+		MIT1002_03133	0.69	-0.2
3,489,346	-		MIT1002_03133	0.69	-0.9
3,489,592	+		MIT1002_03133	0.89	+0.6
3,489,592	+		MIT1002_03133	0.89	-1.9
3,489,592	+		MIT1002_03133	0.89	-1.3
3,489,592	+		MIT1002_03133	0.89	+1.1
3,489,592	+		MIT1002_03133	0.89	-0.8
3,489,600	-		MIT1002_03133	0.89	-0.8
3,489,600	-		MIT1002_03133	0.89	-2.5
3,489,600	-		MIT1002_03133	0.89	+0.2
3,489,600	-		MIT1002_03133	0.89	-0.2
3,489,612	-				-1.5
3,489,643	-				+0.5
3,489,659	+				+0.5
3,489,718	+				-0.1
3,489,767	-				-0.9
3,489,851	-				-0.3
3,489,908	-		MIT1002_03134	0.11	-0.4
3,489,918	-		MIT1002_03134	0.11	-1.2
3,490,006	+		MIT1002_03134	0.17	-2.3
3,490,009	-		MIT1002_03134	0.17	-0.9
3,490,016	+		MIT1002_03134	0.17	-0.3
3,490,016	+		MIT1002_03134	0.17	-0.1
3,490,016	+		MIT1002_03134	0.17	-0.0
3,490,016	+		MIT1002_03134	0.17	+0.5
3,490,016	+		MIT1002_03134	0.17	+0.6
3,490,024	-		MIT1002_03134	0.18	-0.6
3,490,024	-		MIT1002_03134	0.18	-1.4
3,490,024	-		MIT1002_03134	0.18	-1.1
3,490,024	-		MIT1002_03134	0.18	+0.7
3,490,059	+		MIT1002_03134	0.20	+0.8
3,490,068	-		MIT1002_03134	0.21	-2.2
3,490,113	-		MIT1002_03134	0.24	+0.9
3,490,180	-		MIT1002_03134	0.28	-1.4
3,490,209	-		MIT1002_03134	0.30	-0.9
3,490,210	+		MIT1002_03134	0.30	-0.5
3,490,304	+		MIT1002_03134	0.36	+0.7
3,490,317	-		MIT1002_03134	0.36	-2.0
3,490,374	+		MIT1002_03134	0.40	-0.4
3,490,374	+		MIT1002_03134	0.40	-0.8
3,490,374	+		MIT1002_03134	0.40	-1.4
3,490,382	-		MIT1002_03134	0.41	-0.0
3,490,382	-		MIT1002_03134	0.41	-0.7
3,490,382	-		MIT1002_03134	0.41	+0.1
3,490,433	-		MIT1002_03134	0.44	+1.5
3,490,440	-		MIT1002_03134	0.44	-1.4
3,490,475	+		MIT1002_03134	0.46	+1.4
3,490,483	-		MIT1002_03134	0.47	+0.9
3,490,550	-		MIT1002_03134	0.51	+0.8
3,490,556	+		MIT1002_03134	0.52	-0.3
3,490,573	+		MIT1002_03134	0.53	+1.3
3,490,586	+		MIT1002_03134	0.53	-2.0
3,490,594	+		MIT1002_03134	0.54	-0.0
3,490,611	-		MIT1002_03134	0.55	+0.6
3,490,646	-		MIT1002_03134	0.57	-1.8
3,490,667	+		MIT1002_03134	0.59	-0.7
3,490,675	-		MIT1002_03134	0.59	+0.9