Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03010

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
3,353,028	-				-1.3
3,353,028	-				+1.0
3,353,057	-				-1.9
3,353,061	+				-0.3
3,353,069	-				+0.1
3,353,095	-				+1.3
3,353,319	-				+0.4
3,353,369	+				-0.5
3,353,377	-				+1.4
3,353,377	-				-0.5
3,353,385	+				-0.4
3,353,391	-				+2.4
3,353,449	-				-1.5
3,353,547	+		MIT1002_03009	0.31	+1.5
3,353,838	+				+1.4
3,353,882	-				-1.6
3,353,959	+				-1.3
3,353,959	+				+0.2
3,354,146	+		MIT1002_03010	0.19	+0.1
3,354,146	+		MIT1002_03010	0.19	+1.7
3,354,146	+		MIT1002_03010	0.19	+0.6
3,354,146	+		MIT1002_03010	0.19	+0.2
3,354,154	-		MIT1002_03010	0.20	-1.6
3,354,154	-		MIT1002_03010	0.20	+0.8
3,354,154	-		MIT1002_03010	0.20	+1.1
3,354,154	-		MIT1002_03010	0.20	-0.0
3,354,160	-		MIT1002_03010	0.20	+0.6
3,354,241	-		MIT1002_03010	0.27	+0.0
3,354,345	-		MIT1002_03010	0.36	-0.1
3,354,414	+		MIT1002_03010	0.41	+1.3
3,354,422	-		MIT1002_03010	0.42	-0.2
3,354,422	-		MIT1002_03010	0.42	+0.0
3,354,527	+		MIT1002_03010	0.51	-0.7
3,354,634	-		MIT1002_03010	0.60	-2.2
3,354,723	+		MIT1002_03010	0.67	+1.8
3,354,785	-		MIT1002_03010	0.72	+1.9
3,354,809	-		MIT1002_03010	0.74	+0.2
3,354,849	+		MIT1002_03010	0.78	+1.1
3,354,886	+		MIT1002_03010	0.81	-1.5
3,354,936	+		MIT1002_03010	0.85	+0.8
3,354,936	+		MIT1002_03010	0.85	-0.6
3,354,944	-		MIT1002_03010	0.85	-1.3
3,355,023	+				-0.2
3,355,031	-				-2.0
3,355,109	+				+1.1
3,355,112	-				-0.8
3,355,119	+				+0.5
3,355,119	+				-0.4
3,355,122	-				-0.1
3,355,124	+				-0.2
3,355,198	+				+1.2
3,355,208	+				-1.0
3,355,208	+				+0.9
3,355,239	+				+0.9
3,355,382	+		MIT1002_03011	0.23	+1.2
3,355,382	+		MIT1002_03011	0.23	+0.1
3,355,552	-		MIT1002_03011	0.43	-0.1
3,355,997	+				-0.2