Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02920

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
3,244,811	+		MIT1002_02919	0.62	+0.5
3,244,828	+		MIT1002_02919	0.63	-1.4
3,244,829	+		MIT1002_02919	0.63	-1.0
3,244,966	+		MIT1002_02919	0.71	+0.0
3,244,966	+		MIT1002_02919	0.71	-1.0
3,244,974	-		MIT1002_02919	0.72	-0.2
3,244,974	-		MIT1002_02919	0.72	+0.3
3,245,015	-		MIT1002_02919	0.74	+0.5
3,245,130	-		MIT1002_02919	0.81	+0.1
3,245,144	-		MIT1002_02919	0.82	+0.2
3,245,331	-				-0.5
3,245,387	+				-1.3
3,245,395	-				-0.8
3,245,395	-				+2.2
3,245,686	+				+1.2
3,245,702	-				-2.0
3,245,838	+		MIT1002_02920	0.14	+0.2
3,245,901	-		MIT1002_02920	0.25	+1.2
3,245,963	-		MIT1002_02920	0.36	+0.5
3,245,963	-		MIT1002_02920	0.36	-0.8
3,245,987	-		MIT1002_02920	0.41	-1.7
3,245,987	-		MIT1002_02920	0.41	+0.6
3,246,005	+		MIT1002_02920	0.44	+1.6
3,246,040	+		MIT1002_02920	0.50	-2.5
3,246,061	-		MIT1002_02920	0.54	-0.4
3,246,074	-		MIT1002_02920	0.57	+0.0
3,246,111	-		MIT1002_02920	0.63	+0.7
3,246,112	+		MIT1002_02920	0.63	-1.2
3,246,176	+		MIT1002_02920	0.75	-0.1
3,246,183	+		MIT1002_02920	0.76	-1.3
3,246,203	+		MIT1002_02920	0.80	+0.2
3,246,231	+		MIT1002_02920	0.85	+1.6
3,246,275	+				-1.4
3,246,350	+				+1.0
3,246,350	+				+1.8
3,246,350	+				+1.1
3,246,350	+				+0.4
3,246,350	+				+2.6
3,246,350	+				+0.5
3,246,350	+				+0.2
3,246,350	+				+0.9
3,246,350	+				-0.8
3,246,350	+				+0.7
3,246,350	+				-0.8
3,246,350	+				+0.4
3,246,350	+				-0.9
3,246,350	+				-0.1
3,246,350	+				-0.5
3,246,350	+				+0.1
3,246,350	+				+0.4
3,246,350	+				+0.2
3,246,350	+				+1.0
3,246,350	+				-0.4
3,246,353	-				-0.2
3,246,358	-				+0.2
3,246,358	-				+0.0
3,246,358	-				-1.9
3,246,358	-				+0.9
3,246,358	-				-0.4
3,246,358	-				-0.7
3,246,358	-				+0.9
3,246,358	-				+0.8
3,246,358	-				-0.7
3,246,358	-				+1.0
3,246,358	-				-0.9
3,246,358	-				+0.2
3,246,358	-				+0.6
3,246,358	-				+2.2
3,246,358	-				-0.1
3,246,358	-				-0.3
3,246,360	-				-1.8
3,246,360	-				-1.9
3,246,360	-				+0.8
3,246,438	+		MIT1002_02921	0.10	+1.1
3,246,438	+		MIT1002_02921	0.10	-0.6
3,246,438	-		MIT1002_02921	0.10	-1.3
3,246,460	-		MIT1002_02921	0.12	-0.3
3,246,460	-		MIT1002_02921	0.12	+2.1
3,246,462	+		MIT1002_02921	0.12	+0.3
3,246,474	+		MIT1002_02921	0.13	-0.2
3,246,482	-		MIT1002_02921	0.14	-0.8
3,246,489	+		MIT1002_02921	0.15	+1.0
3,246,489	+		MIT1002_02921	0.15	+1.5
3,246,489	+		MIT1002_02921	0.15	+0.1
3,246,489	+		MIT1002_02921	0.15	-0.8
3,246,489	+		MIT1002_02921	0.15	-1.3
3,246,489	+		MIT1002_02921	0.15	-0.1
3,246,489	+		MIT1002_02921	0.15	-1.6
3,246,489	+		MIT1002_02921	0.15	-1.1
3,246,489	+		MIT1002_02921	0.15	-1.3
3,246,489	+		MIT1002_02921	0.15	+0.9
3,246,489	+		MIT1002_02921	0.15	+0.8
3,246,489	+		MIT1002_02921	0.15	-1.0
3,246,489	+		MIT1002_02921	0.15	-0.9
3,246,489	+		MIT1002_02921	0.15	-0.1
3,246,489	+		MIT1002_02921	0.15	+0.9
3,246,489	+		MIT1002_02921	0.15	+0.7
3,246,497	-		MIT1002_02921	0.16	+0.6
3,246,497	-		MIT1002_02921	0.16	-0.4
3,246,497	-		MIT1002_02921	0.16	+0.1
3,246,497	-		MIT1002_02921	0.16	+1.3
3,246,497	-		MIT1002_02921	0.16	+0.1
3,246,497	-		MIT1002_02921	0.16	+0.2
3,246,497	-		MIT1002_02921	0.16	-0.9
3,246,497	-		MIT1002_02921	0.16	-0.2
3,246,497	-		MIT1002_02921	0.16	-0.2
3,246,497	-		MIT1002_02921	0.16	+3.2
3,246,497	-		MIT1002_02921	0.16	+0.2
3,246,497	-		MIT1002_02921	0.16	-0.7
3,246,508	+		MIT1002_02921	0.17	-1.8
3,246,516	-		MIT1002_02921	0.17	-0.6
3,246,519	-		MIT1002_02921	0.18	-0.1
3,246,616	+		MIT1002_02921	0.27	-0.3
3,246,647	+		MIT1002_02921	0.30	+1.3
3,246,735	-		MIT1002_02921	0.38	+1.2
3,246,748	+		MIT1002_02921	0.39	+0.5
3,246,757	-		MIT1002_02921	0.40	-0.8
3,246,757	-		MIT1002_02921	0.40	-2.8
3,246,762	-		MIT1002_02921	0.41	+0.8
3,246,764	-		MIT1002_02921	0.41	+0.9
3,246,791	+		MIT1002_02921	0.43	-1.1
3,246,835	+		MIT1002_02921	0.47	+1.6
3,246,843	+		MIT1002_02921	0.48	-0.1
3,246,848	+		MIT1002_02921	0.49	+1.5
3,246,852	-		MIT1002_02921	0.49	+1.0
3,246,921	+		MIT1002_02921	0.56	-0.4
3,246,956	-		MIT1002_02921	0.59	+1.3
3,247,016	+		MIT1002_02921	0.65	-0.7
3,247,016	+		MIT1002_02921	0.65	+0.7
3,247,016	+		MIT1002_02921	0.65	-0.6
3,247,016	+		MIT1002_02921	0.65	+0.2
3,247,016	+		MIT1002_02921	0.65	-1.9
3,247,024	-		MIT1002_02921	0.65	+0.5
3,247,024	-		MIT1002_02921	0.65	-1.7
3,247,024	-		MIT1002_02921	0.65	-1.5
3,247,024	-		MIT1002_02921	0.65	+3.4
3,247,024	-		MIT1002_02921	0.65	+1.7
3,247,051	+		MIT1002_02921	0.68	-0.1
3,247,061	-		MIT1002_02921	0.69	-0.7
3,247,149	-		MIT1002_02921	0.77	+0.5
3,247,182	-		MIT1002_02921	0.80	+0.4
3,247,182	-		MIT1002_02921	0.80	+1.8
3,247,238	+		MIT1002_02921	0.85	-1.7
3,247,271	+		MIT1002_02921	0.89	+0.3
3,247,271	+		MIT1002_02921	0.89	+0.1
3,247,279	-		MIT1002_02921	0.89	-0.6
3,247,279	-		MIT1002_02921	0.89	-1.4