Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02856

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
3,169,666	-		MIT1002_02855	0.24	-0.7
3,169,681	-		MIT1002_02855	0.26	-1.8
3,169,682	-		MIT1002_02855	0.26	+0.4
3,169,744	-		MIT1002_02855	0.32	-0.9
3,169,795	-		MIT1002_02855	0.36	-0.4
3,169,801	-		MIT1002_02855	0.37	-1.0
3,169,811	-		MIT1002_02855	0.38	-0.2
3,169,907	+		MIT1002_02855	0.46	-0.5
3,170,053	-		MIT1002_02855	0.59	+0.7
3,170,094	-		MIT1002_02855	0.63	+0.4
3,170,161	-		MIT1002_02855	0.69	-0.8
3,170,165	+		MIT1002_02855	0.70	-0.4
3,170,217	-		MIT1002_02855	0.74	+1.8
3,170,261	+		MIT1002_02855	0.78	+0.9
3,170,261	+		MIT1002_02855	0.78	+0.4
3,170,269	-		MIT1002_02855	0.79	+0.1
3,170,269	-		MIT1002_02855	0.79	-0.7
3,170,279	+		MIT1002_02855	0.80	-1.1
3,170,279	-		MIT1002_02855	0.80	-0.6
3,170,287	-		MIT1002_02855	0.81	+0.7
3,170,291	+		MIT1002_02855	0.81	-0.4
3,170,319	+		MIT1002_02855	0.83	-2.0
3,170,319	+		MIT1002_02855	0.83	+1.2
3,170,371	+		MIT1002_02855	0.88	-0.1
3,170,566	-				+0.4
3,170,586	-				+0.4
3,170,779	-		MIT1002_02856	0.27	-0.8
3,170,825	+		MIT1002_02856	0.31	+1.0
3,170,861	-		MIT1002_02856	0.35	-0.1
3,170,923	+		MIT1002_02856	0.41	+1.4
3,170,936	-		MIT1002_02856	0.42	-0.5
3,170,936	-		MIT1002_02856	0.42	+1.2
3,170,951	+		MIT1002_02856	0.44	+0.7
3,171,010	-		MIT1002_02856	0.49	+0.0
3,171,029	+		MIT1002_02856	0.51	-0.8
3,171,108	-		MIT1002_02856	0.59	-0.5
3,171,113	-		MIT1002_02856	0.59	+0.3
3,171,128	+		MIT1002_02856	0.61	+1.1
3,171,130	+		MIT1002_02856	0.61	-0.8
3,171,164	+		MIT1002_02856	0.64	+0.2
3,171,199	+		MIT1002_02856	0.68	+1.4
3,171,213	-		MIT1002_02856	0.69	-1.7
3,171,216	-		MIT1002_02856	0.69	+0.7
3,171,247	-		MIT1002_02856	0.73	-0.1
3,171,287	-		MIT1002_02856	0.76	+1.2
3,171,293	-		MIT1002_02856	0.77	-0.1
3,171,330	+		MIT1002_02856	0.81	+0.0
3,171,338	-		MIT1002_02856	0.81	-0.7
3,171,386	+		MIT1002_02856	0.86	+0.8
3,171,391	+		MIT1002_02856	0.87	-0.6
3,171,391	+		MIT1002_02856	0.87	+1.6
3,171,391	+		MIT1002_02856	0.87	-0.9
3,171,391	+		MIT1002_02856	0.87	-1.0
3,171,391	+		MIT1002_02856	0.87	+1.2
3,171,391	+		MIT1002_02856	0.87	-1.6
3,171,399	-		MIT1002_02856	0.87	+0.6
3,171,399	-		MIT1002_02856	0.87	-0.2
3,171,399	-		MIT1002_02856	0.87	-0.8
3,171,401	+		MIT1002_02856	0.88	+0.5
3,171,401	+		MIT1002_02856	0.88	-1.4
3,171,419	-		MIT1002_02856	0.89	+0.7
3,171,419	-		MIT1002_02856	0.89	+1.7
3,171,437	-				+3.7
3,171,465	+				-1.5
3,171,545	+				-0.2
3,171,688	+		MIT1002_02857	0.16	-0.2
3,171,742	+		MIT1002_02857	0.22	-0.1
3,171,756	-		MIT1002_02857	0.24	+1.1
3,171,773	+		MIT1002_02857	0.26	+0.9
3,171,781	-		MIT1002_02857	0.27	-1.3
3,171,829	+		MIT1002_02857	0.32	+0.2
3,171,846	+		MIT1002_02857	0.34	+1.9
3,171,847	+		MIT1002_02857	0.34	+0.2
3,171,854	-		MIT1002_02857	0.35	+0.9
3,171,865	+		MIT1002_02857	0.36	-0.2
3,171,888	-		MIT1002_02857	0.39	+1.0
3,171,896	-		MIT1002_02857	0.40	-0.3
3,171,981	-		MIT1002_02857	0.49	-0.0
3,172,041	+		MIT1002_02857	0.56	+0.3
3,172,096	-		MIT1002_02857	0.62	+0.3
3,172,208	-		MIT1002_02857	0.75	-0.8
3,172,248	-		MIT1002_02857	0.80	+1.0
3,172,305	-		MIT1002_02857	0.86	-1.8
3,172,340	-				-0.3
3,172,450	-				+0.1