Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02624

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
2,920,447	-		MIT1002_02623	0.32	-0.0
2,920,449	+		MIT1002_02623	0.32	+2.6
2,920,501	-		MIT1002_02623	0.36	+1.2
2,920,501	-		MIT1002_02623	0.36	+1.1
2,920,555	-		MIT1002_02623	0.40	+1.2
2,920,619	+		MIT1002_02623	0.45	-0.1
2,920,621	+		MIT1002_02623	0.46	+0.5
2,920,635	+		MIT1002_02623	0.47	+0.1
2,920,694	+		MIT1002_02623	0.51	+0.2
2,920,705	+		MIT1002_02623	0.52	-0.8
2,920,705	+		MIT1002_02623	0.52	+0.1
2,920,705	+		MIT1002_02623	0.52	+1.2
2,920,713	-		MIT1002_02623	0.53	-0.1
2,920,713	-		MIT1002_02623	0.53	+1.2
2,920,713	-		MIT1002_02623	0.53	+1.7
2,920,883	-		MIT1002_02623	0.66	+0.1
2,920,885	+		MIT1002_02623	0.66	+0.3
2,920,953	+		MIT1002_02623	0.71	-0.5
2,920,972	-		MIT1002_02623	0.72	+0.4
2,921,052	+		MIT1002_02623	0.79	-1.9
2,921,108	+		MIT1002_02623	0.83	-1.7
2,921,108	-		MIT1002_02623	0.83	-1.5
2,921,139	-		MIT1002_02623	0.85	-0.2
2,921,153	+		MIT1002_02623	0.86	+0.1
2,921,161	-		MIT1002_02623	0.87	+0.4
2,921,161	-		MIT1002_02623	0.87	+0.5
2,921,194	+		MIT1002_02623	0.89	+0.8
2,921,234	+				-0.2
2,921,246	+				+0.4
2,921,246	+				+0.1
2,921,318	+				+0.4
2,921,385	+				+0.4
2,921,420	-				-0.7
2,921,597	+		MIT1002_02624	0.17	+1.5
2,921,702	-		MIT1002_02624	0.28	+1.0
2,921,726	+		MIT1002_02624	0.31	-1.2
2,921,734	-		MIT1002_02624	0.32	-0.5
2,921,936	+		MIT1002_02624	0.54	+2.3
2,921,937	-		MIT1002_02624	0.54	+2.8
2,922,000	+		MIT1002_02624	0.61	+0.0
2,922,000	+		MIT1002_02624	0.61	+0.2
2,922,008	-		MIT1002_02624	0.62	-1.8
2,922,012	+		MIT1002_02624	0.62	+0.9
2,922,012	+		MIT1002_02624	0.62	-1.5
2,922,012	+		MIT1002_02624	0.62	-0.1
2,922,012	+		MIT1002_02624	0.62	+0.2
2,922,020	-		MIT1002_02624	0.63	-1.2
2,922,020	-		MIT1002_02624	0.63	-0.9
2,922,020	-		MIT1002_02624	0.63	-1.5
2,922,020	-		MIT1002_02624	0.63	+0.6
2,922,020	-		MIT1002_02624	0.63	-0.5
2,922,020	-		MIT1002_02624	0.63	+1.1
2,922,072	-		MIT1002_02624	0.69	+0.8
2,922,119	+		MIT1002_02624	0.74	+0.9
2,922,262	-		MIT1002_02624	0.90	-0.6
2,922,262	-		MIT1002_02624	0.90	+0.1
2,922,309	+				+0.8
2,922,425	-				+1.1
2,922,518	+				+1.2
2,922,523	+				-0.2
2,922,571	-		MIT1002_02625	0.13	-1.4
2,922,683	-		MIT1002_02625	0.36	-0.8
2,922,744	+		MIT1002_02625	0.49	+0.6
2,922,751	-		MIT1002_02625	0.51	-0.9
2,922,827	-		MIT1002_02625	0.66	+0.2
2,922,878	-		MIT1002_02625	0.77	-1.2
2,922,887	-		MIT1002_02625	0.79	+1.5
2,923,032	-				-0.8
2,923,120	+				+0.2
2,923,120	+				-1.4
2,923,120	+				+0.1
2,923,128	-				+0.7
2,923,157	-		MIT1002_02626	0.11	+2.3
2,923,200	+		MIT1002_02626	0.28	-0.3
2,923,205	+		MIT1002_02626	0.30	+0.2
2,923,242	+		MIT1002_02626	0.46	-0.8
2,923,251	+		MIT1002_02626	0.49	+0.5
2,923,259	-		MIT1002_02626	0.52	+1.2
2,923,279	-		MIT1002_02626	0.61	+0.7
2,923,347	+		MIT1002_02626	0.88	+0.4