Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02559

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
2,856,952	+		MIT1002_02558	0.72	-0.6
2,856,960	+		MIT1002_02558	0.72	+0.8
2,856,960	+		MIT1002_02558	0.72	+0.5
2,856,960	+		MIT1002_02558	0.72	+0.1
2,856,968	-		MIT1002_02558	0.72	+0.1
2,856,970	+		MIT1002_02558	0.73	-0.1
2,856,970	+		MIT1002_02558	0.73	+1.3
2,856,970	+		MIT1002_02558	0.73	-2.0
2,856,970	+		MIT1002_02558	0.73	+0.4
2,856,970	+		MIT1002_02558	0.73	-0.8
2,856,978	-		MIT1002_02558	0.73	+1.1
2,856,978	-		MIT1002_02558	0.73	-0.8
2,856,978	-		MIT1002_02558	0.73	+0.9
2,856,978	-		MIT1002_02558	0.73	-0.4
2,856,978	-		MIT1002_02558	0.73	-0.9
2,856,978	-		MIT1002_02558	0.73	-1.0
2,856,981	+		MIT1002_02558	0.73	-2.0
2,856,981	+		MIT1002_02558	0.73	+1.3
2,857,067	-		MIT1002_02558	0.76	+0.4
2,857,126	-		MIT1002_02558	0.78	-0.0
2,857,180	-		MIT1002_02558	0.80	-1.9
2,857,206	+		MIT1002_02558	0.81	-1.5
2,857,211	+		MIT1002_02558	0.81	+0.1
2,857,284	-		MIT1002_02558	0.84	-2.0
2,857,287	+		MIT1002_02558	0.84	+0.2
2,857,293	-		MIT1002_02558	0.84	-0.6
2,857,399	-		MIT1002_02558	0.88	+0.1
2,857,399	-		MIT1002_02558	0.88	-0.9
2,857,413	+		MIT1002_02558	0.89	+0.8
2,857,423	+		MIT1002_02558	0.89	-0.0
2,857,450	+		MIT1002_02558	0.90	-0.4
2,857,463	+				-0.8
2,857,525	+				+0.2
2,857,549	+				-3.1
2,857,550	+				-1.0
2,857,557	+				+0.3
2,857,565	-				-0.9
2,857,576	+				-0.5
2,857,657	+				-0.6
2,857,678	+				+1.0
2,857,678	+				-0.7
2,857,712	+				+0.5
2,857,719	-				-0.7
2,857,720	-				+1.7
2,857,742	-				-0.7
2,857,742	-				-1.4
2,857,834	+				-1.4
2,857,953	-				-0.3
2,858,012	+		MIT1002_02559	0.28	-0.3
2,858,176	-		MIT1002_02559	0.83	-0.3
2,858,176	-		MIT1002_02559	0.83	-0.9
2,858,206	-				+0.5
2,858,225	+				+0.5
2,858,295	+				+0.0
2,858,305	-				+0.5
2,858,311	+				-0.8
2,858,341	-				+0.5
2,858,354	-				-0.4
2,858,405	+				+0.5
2,858,405	+				-1.8
2,858,422	+				+0.7
2,858,432	-				-0.9
2,858,433	-				+1.3
2,858,469	+		MIT1002_02560	0.13	-1.0
2,858,505	+		MIT1002_02560	0.16	-1.8
2,858,505	+		MIT1002_02560	0.16	-0.2
2,858,528	+		MIT1002_02560	0.18	-1.3
2,858,540	+		MIT1002_02560	0.19	-0.4
2,858,548	-		MIT1002_02560	0.20	-0.6
2,858,579	+		MIT1002_02560	0.22	+0.8
2,858,589	-		MIT1002_02560	0.23	+0.1
2,858,619	-		MIT1002_02560	0.26	-0.8
2,858,654	-		MIT1002_02560	0.29	-0.8
2,858,687	+		MIT1002_02560	0.31	-0.5
2,858,687	+		MIT1002_02560	0.31	-0.2
2,858,862	+		MIT1002_02560	0.46	+0.5
2,858,862	+		MIT1002_02560	0.46	-0.9
2,858,875	-		MIT1002_02560	0.48	-0.1
2,858,999	+		MIT1002_02560	0.58	-0.3
2,859,034	+		MIT1002_02560	0.61	-1.9
2,859,120	-		MIT1002_02560	0.69	-0.4
2,859,135	+		MIT1002_02560	0.70	-1.1
2,859,191	-		MIT1002_02560	0.75	+0.4
2,859,204	+		MIT1002_02560	0.76	+0.6