Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02376

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
2,652,276	+		MIT1002_02375	0.26	+0.3
2,652,306	-		MIT1002_02375	0.31	+0.1
2,652,308	+		MIT1002_02375	0.31	+0.5
2,652,308	+		MIT1002_02375	0.31	-1.2
2,652,308	+		MIT1002_02375	0.31	+0.6
2,652,313	+		MIT1002_02375	0.32	-0.7
2,652,314	-		MIT1002_02375	0.32	-1.3
2,652,392	+		MIT1002_02375	0.45	+0.7
2,652,398	+		MIT1002_02375	0.46	-0.2
2,652,406	-		MIT1002_02375	0.47	+0.1
2,652,442	-		MIT1002_02375	0.53	+0.5
2,652,448	-		MIT1002_02375	0.54	-0.1
2,652,448	-		MIT1002_02375	0.54	+1.0
2,652,541	-		MIT1002_02375	0.69	-0.5
2,652,597	+		MIT1002_02375	0.79	+0.7
2,652,639	+		MIT1002_02375	0.85	+2.1
2,652,654	-		MIT1002_02375	0.88	-0.1
2,652,672	-				-0.7
2,652,769	+				-0.6
2,652,844	+				+1.3
2,652,844	+				-0.5
2,652,862	-				+0.0
2,652,897	+				-0.6
2,652,897	+				-0.4
2,652,899	+				-2.4
2,652,905	-				-1.0
2,652,970	+				+0.7
2,653,007	-				-0.3
2,653,119	+				-0.4
2,653,134	+				-0.3
2,653,312	+				-0.5
2,653,359	-				+0.4
2,653,396	-				+0.3
2,653,403	+				+0.5
2,653,409	+		MIT1002_02376	0.10	-2.0
2,653,461	-		MIT1002_02376	0.14	+0.9
2,653,481	+		MIT1002_02376	0.16	+0.5
2,653,510	+		MIT1002_02376	0.18	-1.8
2,653,511	-		MIT1002_02376	0.18	+0.4
2,653,517	-		MIT1002_02376	0.19	+1.8
2,653,573	-		MIT1002_02376	0.23	-0.4
2,653,649	-		MIT1002_02376	0.28	-1.1
2,653,709	-		MIT1002_02376	0.33	-0.8
2,653,720	-		MIT1002_02376	0.34	-1.8
2,653,747	-		MIT1002_02376	0.36	-1.9
2,653,912	-		MIT1002_02376	0.48	-0.8
2,653,995	+		MIT1002_02376	0.54	-0.3
2,654,059	+		MIT1002_02376	0.59	-0.9
2,654,125	-		MIT1002_02376	0.64	+0.9
2,654,125	-		MIT1002_02376	0.64	-0.1
2,654,125	-		MIT1002_02376	0.64	+1.1
2,654,130	-		MIT1002_02376	0.65	-1.6
2,654,142	+		MIT1002_02376	0.65	-1.2
2,654,147	+		MIT1002_02376	0.66	-0.6
2,654,189	-		MIT1002_02376	0.69	-0.1
2,654,212	+		MIT1002_02376	0.71	+1.1
2,654,287	+		MIT1002_02376	0.76	-0.6
2,654,293	+		MIT1002_02376	0.77	+0.1
2,654,293	+		MIT1002_02376	0.77	-0.9
2,654,293	+		MIT1002_02376	0.77	-0.1
2,654,306	-		MIT1002_02376	0.78	+0.4
2,654,362	+		MIT1002_02376	0.82	-0.1
2,654,408	-		MIT1002_02376	0.85	+0.5
2,654,600	+				-1.3
2,654,630	+				-0.8
2,654,672	+		MIT1002_02377	0.24	+1.4
2,654,672	+		MIT1002_02377	0.24	+0.4
2,654,680	-		MIT1002_02377	0.28	+0.8
2,654,775	+		MIT1002_02377	0.70	+0.8
2,654,790	+		MIT1002_02377	0.76	+0.8
2,654,798	-		MIT1002_02377	0.80	+0.7
2,654,798	-		MIT1002_02377	0.80	+0.9