Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02316

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
2,582,108	+				+0.3
2,582,114	+				+1.6
2,582,130	+				+1.1
2,582,136	+		MIT1002_02315	0.11	+2.9
2,582,138	-		MIT1002_02315	0.11	-0.7
2,582,138	-		MIT1002_02315	0.11	+0.4
2,582,141	+		MIT1002_02315	0.11	-0.0
2,582,149	-		MIT1002_02315	0.12	-1.0
2,582,149	-		MIT1002_02315	0.12	+1.0
2,582,194	-		MIT1002_02315	0.17	+0.0
2,582,203	+		MIT1002_02315	0.17	-1.0
2,582,206	-		MIT1002_02315	0.18	+0.4
2,582,211	-		MIT1002_02315	0.18	+0.3
2,582,211	-		MIT1002_02315	0.18	-0.8
2,582,241	+		MIT1002_02315	0.21	-1.7
2,582,249	-		MIT1002_02315	0.22	+1.5
2,582,249	-		MIT1002_02315	0.22	+0.8
2,582,251	+		MIT1002_02315	0.22	+2.7
2,582,259	-		MIT1002_02315	0.23	-0.9
2,582,386	-		MIT1002_02315	0.36	-0.7
2,582,454	+		MIT1002_02315	0.43	-0.7
2,582,517	-		MIT1002_02315	0.50	-1.0
2,582,525	-		MIT1002_02315	0.50	-3.0
2,582,553	+		MIT1002_02315	0.53	-0.0
2,582,553	+		MIT1002_02315	0.53	-1.1
2,582,553	+		MIT1002_02315	0.53	-1.2
2,582,561	-		MIT1002_02315	0.54	-0.6
2,582,561	-		MIT1002_02315	0.54	+0.1
2,582,651	-		MIT1002_02315	0.63	+0.3
2,582,702	-		MIT1002_02315	0.69	-1.0
2,582,755	+		MIT1002_02315	0.74	+0.8
2,582,785	-		MIT1002_02315	0.77	-0.5
2,582,785	-		MIT1002_02315	0.77	+0.8
2,582,985	-				+0.7
2,583,021	+				+0.3
2,583,132	+				-0.5
2,583,172	+				+0.3
2,583,180	-				-2.2
2,583,199	+		MIT1002_02316	0.11	-0.6
2,583,324	-		MIT1002_02316	0.23	+0.7
2,583,346	-		MIT1002_02316	0.25	+0.9
2,583,524	-		MIT1002_02316	0.42	+0.9
2,583,608	+		MIT1002_02316	0.50	+2.6
2,583,611	+		MIT1002_02316	0.50	+1.0
2,583,613	+		MIT1002_02316	0.50	+0.1
2,583,619	-		MIT1002_02316	0.51	+1.5
2,583,673	+		MIT1002_02316	0.56	-0.1
2,583,681	-		MIT1002_02316	0.57	-1.2
2,583,681	-		MIT1002_02316	0.57	-0.1
2,583,701	+		MIT1002_02316	0.58	-0.1
2,583,709	-		MIT1002_02316	0.59	-0.5
2,583,767	+		MIT1002_02316	0.65	-1.7
2,583,767	+		MIT1002_02316	0.65	+0.5
2,583,775	-		MIT1002_02316	0.65	-0.1
2,583,775	-		MIT1002_02316	0.65	+0.5
2,583,809	-		MIT1002_02316	0.69	+0.5
2,583,809	-		MIT1002_02316	0.69	+0.1
2,583,882	+		MIT1002_02316	0.76	-1.4
2,583,949	+		MIT1002_02316	0.82	-0.6
2,583,949	+		MIT1002_02316	0.82	-0.5
2,584,110	+				-1.2
2,584,111	+				-0.5
2,584,227	-				-0.3
2,584,239	+				-0.6
2,584,244	+				-0.4
2,584,244	+				+0.7
2,584,249	+				+0.9
2,584,289	+				+0.1
2,584,290	-				-0.8
2,584,352	+		MIT1002_02317	0.13	+0.1
2,584,368	-		MIT1002_02317	0.14	+0.3
2,584,378	+		MIT1002_02317	0.15	-0.5
2,584,546	-		MIT1002_02317	0.29	-0.1
2,584,591	+		MIT1002_02317	0.32	-0.6
2,584,591	+		MIT1002_02317	0.32	+0.6
2,584,591	+		MIT1002_02317	0.32	-0.1
2,584,599	-		MIT1002_02317	0.33	+1.3
2,584,599	-		MIT1002_02317	0.33	-0.6
2,584,627	+		MIT1002_02317	0.35	+1.1
2,584,628	+		MIT1002_02317	0.35	+0.6
2,584,633	+		MIT1002_02317	0.36	+1.5
2,584,651	-		MIT1002_02317	0.37	+1.0
2,584,761	+		MIT1002_02317	0.46	-1.4
2,584,769	-		MIT1002_02317	0.47	-1.7
2,584,785	+		MIT1002_02317	0.48	+0.1
2,584,793	-		MIT1002_02317	0.49	-0.6
2,584,793	-		MIT1002_02317	0.49	-0.3
2,584,888	+		MIT1002_02317	0.56	+0.2
2,584,907	-		MIT1002_02317	0.58	+0.9
2,585,014	-		MIT1002_02317	0.67	-0.9
2,585,043	-		MIT1002_02317	0.69	+0.8
2,585,122	+		MIT1002_02317	0.75	-0.8