Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02258

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
2,510,932	+		MIT1002_02255	0.76	+2.2
2,510,932	+		MIT1002_02255	0.76	-0.4
2,510,940	-		MIT1002_02255	0.77	+0.1
2,511,014	+		MIT1002_02255	0.85	+0.0
2,511,022	-		MIT1002_02255	0.86	+1.1
2,511,044	+		MIT1002_02255	0.89	-0.4
2,511,045	+		MIT1002_02255	0.89	-0.1
2,511,090	-				+0.2
2,511,141	-				-0.0
2,511,163	+				-0.7
2,511,163	+				+1.7
2,511,202	+				+0.1
2,511,204	+		MIT1002_02256	0.10	+0.5
2,511,207	-		MIT1002_02256	0.11	-2.6
2,511,209	+		MIT1002_02256	0.12	-0.5
2,511,209	+		MIT1002_02256	0.12	-0.1
2,511,212	+		MIT1002_02256	0.12	+0.5
2,511,212	-		MIT1002_02256	0.12	+1.1
2,511,244	-		MIT1002_02256	0.21	+2.3
2,511,360	+		MIT1002_02256	0.53	-0.7
2,511,366	-		MIT1002_02256	0.54	-0.1
2,511,366	-		MIT1002_02256	0.54	+0.6
2,511,368	-		MIT1002_02256	0.55	+1.9
2,511,368	-		MIT1002_02256	0.55	-0.4
2,511,368	-		MIT1002_02256	0.55	-0.0
2,511,368	-		MIT1002_02256	0.55	-0.6
2,511,409	-		MIT1002_02256	0.66	+0.7
2,511,523	-				+0.0
2,511,537	-				+0.6
2,511,537	-				-1.2
2,511,537	-				+0.9
2,511,537	-				-2.7
2,511,648	-		MIT1002_02257	0.26	-0.8
2,511,655	-		MIT1002_02257	0.28	-0.7
2,511,690	+		MIT1002_02257	0.38	+0.3
2,511,848	-		MIT1002_02257	0.79	+0.1
2,511,864	-		MIT1002_02257	0.84	+0.7
2,511,959	+				-0.4
2,512,312	+		MIT1002_02258	0.50	-0.4
2,512,388	-		MIT1002_02258	0.60	+1.9
2,512,404	+		MIT1002_02258	0.62	+0.8
2,512,404	+		MIT1002_02258	0.62	-0.5
2,512,404	+		MIT1002_02258	0.62	-0.4
2,512,456	-		MIT1002_02258	0.68	+0.3
2,512,523	-		MIT1002_02258	0.77	+0.7
2,512,534	+		MIT1002_02258	0.78	-2.5
2,512,548	+		MIT1002_02258	0.80	+0.2
2,512,557	-		MIT1002_02258	0.81	+1.5
2,512,615	-		MIT1002_02258	0.88	+0.5
2,512,645	-				+0.3
2,512,674	+				+2.7
2,512,682	-				+0.3
2,512,684	-				-0.8
2,512,690	-				-0.3
2,512,758	+				+0.6
2,512,760	-				-1.3
2,512,792	+				-0.1
2,512,817	+				-0.5
2,512,819	+				-0.0
2,512,848	-				+0.2
2,512,857	+				-0.3
2,512,874	+				-0.9
2,512,891	+				+1.0
2,512,904	-				-0.6
2,512,935	-				-1.5
2,512,986	-				-0.3
2,513,006	-				+2.3
2,513,006	-				+0.5
2,513,015	+				-0.4
2,513,067	+		MIT1002_02259	0.12	+0.9
2,513,067	+		MIT1002_02259	0.12	-1.3
2,513,116	+		MIT1002_02259	0.14	+0.5
2,513,166	-		MIT1002_02259	0.17	-0.9
2,513,194	+		MIT1002_02259	0.19	+0.4
2,513,199	+		MIT1002_02259	0.19	-0.8
2,513,214	-		MIT1002_02259	0.20	+2.4
2,513,216	+		MIT1002_02259	0.20	-1.8
2,513,224	-		MIT1002_02259	0.20	+0.3
2,513,295	+		MIT1002_02259	0.25	-2.8
2,513,368	-		MIT1002_02259	0.29	-0.4
2,513,380	-		MIT1002_02259	0.29	-0.2
2,513,380	-		MIT1002_02259	0.29	+0.8
2,513,399	-		MIT1002_02259	0.30	+1.2
2,513,408	+		MIT1002_02259	0.31	-0.8
2,513,416	-		MIT1002_02259	0.31	-0.6
2,513,416	-		MIT1002_02259	0.31	-0.6
2,513,426	-		MIT1002_02259	0.32	-0.8
2,513,436	+		MIT1002_02259	0.33	-0.3
2,513,496	-		MIT1002_02259	0.36	+0.4
2,513,531	+		MIT1002_02259	0.38	+2.0
2,513,531	+		MIT1002_02259	0.38	-0.4
2,513,531	+		MIT1002_02259	0.38	+0.3
2,513,539	-		MIT1002_02259	0.38	+0.1
2,513,539	-		MIT1002_02259	0.38	+0.3
2,513,621	+		MIT1002_02259	0.43	-1.3
2,513,629	-		MIT1002_02259	0.44	-0.7
2,513,642	+		MIT1002_02259	0.44	+0.8
2,513,664	-		MIT1002_02259	0.46	-1.3
2,513,667	+		MIT1002_02259	0.46	-1.3
2,513,667	+		MIT1002_02259	0.46	-0.5
2,513,667	+		MIT1002_02259	0.46	+0.7
2,513,675	-		MIT1002_02259	0.46	+2.6
2,513,675	-		MIT1002_02259	0.46	+1.4