Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02164

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
2,419,035	-		MIT1002_02162	0.87	-0.4
2,419,083	+				-0.2
2,419,083	+				-0.8
2,419,091	-				-0.1
2,419,103	-				+0.5
2,419,109	+				+0.4
2,419,382	+		MIT1002_02163	0.11	-0.6
2,419,422	+		MIT1002_02163	0.20	-2.0
2,419,425	-		MIT1002_02163	0.21	+0.4
2,419,430	-		MIT1002_02163	0.22	-0.0
2,419,452	+		MIT1002_02163	0.27	+1.2
2,419,598	+		MIT1002_02163	0.59	-0.1
2,419,612	-		MIT1002_02163	0.62	-0.7
2,419,625	+		MIT1002_02163	0.65	+1.0
2,419,625	+		MIT1002_02163	0.65	-0.2
2,419,630	+		MIT1002_02163	0.66	+1.5
2,419,653	-		MIT1002_02163	0.72	-0.6
2,419,661	-		MIT1002_02163	0.73	-2.4
2,419,703	+		MIT1002_02163	0.83	+1.3
2,419,867	+				+0.4
2,419,867	+				+0.2
2,419,867	+				-1.4
2,419,867	+				+0.4
2,419,867	+				+0.4
2,419,867	+				+0.3
2,419,867	+				+0.5
2,419,867	+				-0.1
2,419,867	+				-0.6
2,419,867	+				-0.3
2,419,875	-				+1.6
2,419,875	-				-0.2
2,419,875	-				+1.0
2,419,875	-				+1.6
2,419,875	-				+1.9
2,419,875	-				+0.0
2,419,885	-				+0.2
2,419,890	-				-0.8
2,420,000	-				+0.4
2,420,156	-		MIT1002_02164	0.20	-1.1
2,420,158	+		MIT1002_02164	0.20	+0.9
2,420,158	+		MIT1002_02164	0.20	-0.1
2,420,176	-		MIT1002_02164	0.22	+0.2
2,420,198	+		MIT1002_02164	0.25	-1.2
2,420,241	+		MIT1002_02164	0.29	+0.4
2,420,270	-		MIT1002_02164	0.33	+0.2
2,420,292	-		MIT1002_02164	0.35	+0.2
2,420,386	+		MIT1002_02164	0.45	-1.1
2,420,387	-		MIT1002_02164	0.45	-0.9
2,420,394	-		MIT1002_02164	0.46	-0.1
2,420,540	+		MIT1002_02164	0.62	+3.3
2,420,548	-		MIT1002_02164	0.63	+1.0
2,420,548	-		MIT1002_02164	0.63	-1.0
2,420,558	-		MIT1002_02164	0.64	-0.6
2,420,650	+		MIT1002_02164	0.75	+0.6
2,420,650	+		MIT1002_02164	0.75	+0.9
2,420,650	+		MIT1002_02164	0.75	-2.5
2,420,650	+		MIT1002_02164	0.75	+0.7
2,420,658	-		MIT1002_02164	0.75	-0.3
2,420,658	-		MIT1002_02164	0.75	-1.3
2,420,658	-		MIT1002_02164	0.75	-0.6
2,420,746	-		MIT1002_02164	0.85	-0.2
2,420,867	+				+1.0
2,420,868	-				+1.6
2,420,939	-				-0.3
2,420,991	-				+0.5
2,421,038	+				-1.1
2,421,043	+				+0.6
2,421,051	-				+0.8
2,421,064	-				+0.7
2,421,068	+				-0.4
2,421,105	-				+1.2
2,421,135	-				-0.9
2,421,190	+				+0.2
2,421,269	-		MIT1002_02165	0.14	-0.4
2,421,269	-		MIT1002_02165	0.14	-0.3
2,421,376	-		MIT1002_02165	0.21	-1.2
2,421,381	-		MIT1002_02165	0.22	-1.7
2,421,388	-		MIT1002_02165	0.22	+1.6
2,421,409	+		MIT1002_02165	0.24	+0.4
2,421,415	+		MIT1002_02165	0.24	-0.6
2,421,465	+		MIT1002_02165	0.27	-0.8
2,421,467	+		MIT1002_02165	0.28	-0.7
2,421,492	-		MIT1002_02165	0.29	-0.1
2,421,494	+		MIT1002_02165	0.29	-1.5
2,421,551	-		MIT1002_02165	0.33	-0.7
2,421,551	-		MIT1002_02165	0.33	-0.5
2,421,551	-		MIT1002_02165	0.33	+0.8
2,421,597	-		MIT1002_02165	0.36	-1.6
2,421,669	+		MIT1002_02165	0.41	+0.4
2,421,701	-		MIT1002_02165	0.43	-0.1
2,421,777	-		MIT1002_02165	0.49	-0.2
2,421,846	-		MIT1002_02165	0.53	+0.9
2,421,856	+		MIT1002_02165	0.54	+0.2