Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02063

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
2,323,219	-		MIT1002_02062	0.49	-0.3
2,323,251	-		MIT1002_02062	0.51	-0.7
2,323,306	-		MIT1002_02062	0.54	-0.0
2,323,335	-		MIT1002_02062	0.56	+0.7
2,323,358	+		MIT1002_02062	0.57	-1.8
2,323,437	-		MIT1002_02062	0.61	+0.7
2,323,437	-		MIT1002_02062	0.61	-1.6
2,323,437	-		MIT1002_02062	0.61	-0.2
2,323,458	-		MIT1002_02062	0.62	-0.0
2,323,480	+		MIT1002_02062	0.64	+2.2
2,323,628	+		MIT1002_02062	0.72	+0.1
2,323,636	-		MIT1002_02062	0.72	+0.1
2,323,778	+		MIT1002_02062	0.80	+0.3
2,323,778	+		MIT1002_02062	0.80	-0.5
2,323,873	+		MIT1002_02062	0.85	-2.8
2,323,873	+		MIT1002_02062	0.85	+1.1
2,323,881	-		MIT1002_02062	0.85	+0.1
2,323,881	-		MIT1002_02062	0.85	+0.4
2,323,916	-		MIT1002_02062	0.87	-0.3
2,323,918	+		MIT1002_02062	0.87	-1.5
2,323,918	+		MIT1002_02062	0.87	-0.8
2,323,921	-		MIT1002_02062	0.87	-1.5
2,323,926	-		MIT1002_02062	0.88	-0.8
2,323,939	+		MIT1002_02062	0.88	-1.4
2,324,030	+				-0.2
2,324,038	-				+1.4
2,324,038	-				+0.0
2,324,151	+				+1.7
2,324,152	-				+1.4
2,324,152	-				+0.4
2,324,170	-				+0.1
2,324,179	+				-2.0
2,324,179	+				-2.2
2,324,179	+				-0.6
2,324,179	+				-0.5
2,324,179	+				-1.5
2,324,187	-				+0.4
2,324,187	-				-0.6
2,324,187	-				+2.3
2,324,221	+				-0.0
2,324,236	+				-2.2
2,324,246	+				-0.9
2,324,246	+				+1.2
2,324,246	+				+2.5
2,324,256	+				+1.0
2,324,320	-		MIT1002_02063	0.13	-0.3
2,324,404	+		MIT1002_02063	0.20	-0.0
2,324,404	+		MIT1002_02063	0.20	-0.9
2,324,404	+		MIT1002_02063	0.20	+1.3
2,324,509	-		MIT1002_02063	0.28	-0.6
2,324,517	+		MIT1002_02063	0.28	-0.7
2,324,551	+		MIT1002_02063	0.31	-0.2
2,324,551	+		MIT1002_02063	0.31	-1.0
2,324,586	-		MIT1002_02063	0.33	+1.0
2,324,627	-		MIT1002_02063	0.37	-1.5
2,324,646	-		MIT1002_02063	0.38	+0.2
2,324,665	+		MIT1002_02063	0.40	-0.3
2,324,675	+		MIT1002_02063	0.40	+0.7
2,324,706	+		MIT1002_02063	0.43	+1.3
2,324,706	+		MIT1002_02063	0.43	-0.4
2,324,797	+		MIT1002_02063	0.50	-1.1
2,324,797	+		MIT1002_02063	0.50	+1.3
2,324,805	-		MIT1002_02063	0.50	-0.2
2,324,819	+		MIT1002_02063	0.51	-0.0
2,324,819	+		MIT1002_02063	0.51	-2.0
2,324,838	-		MIT1002_02063	0.53	-1.1
2,324,838	-		MIT1002_02063	0.53	+1.5
2,324,874	+		MIT1002_02063	0.56	-0.3
2,324,874	+		MIT1002_02063	0.56	-0.0
2,324,874	+		MIT1002_02063	0.56	+0.7
2,324,882	-		MIT1002_02063	0.56	-1.5
2,324,916	-		MIT1002_02063	0.59	-0.3
2,325,167	-		MIT1002_02063	0.78	+0.4
2,325,364	+				-0.9
2,325,378	-				-1.5
2,325,660	+		MIT1002_02064	0.15	+0.1
2,325,662	+		MIT1002_02064	0.15	+0.4
2,325,680	-		MIT1002_02064	0.17	+2.3
2,325,680	-		MIT1002_02064	0.17	+1.6
2,325,728	+		MIT1002_02064	0.20	+1.0
2,325,730	+		MIT1002_02064	0.20	-0.1
2,325,744	-		MIT1002_02064	0.21	-1.0
2,325,760	+		MIT1002_02064	0.23	-1.0
2,325,949	-		MIT1002_02064	0.37	-0.2
2,325,956	+		MIT1002_02064	0.37	-2.2
2,325,957	-		MIT1002_02064	0.38	+0.9
2,325,957	-		MIT1002_02064	0.38	+0.2
2,325,974	-		MIT1002_02064	0.39	+0.5
2,325,983	+		MIT1002_02064	0.39	-0.8
2,325,998	-		MIT1002_02064	0.41	-0.9
2,326,078	-		MIT1002_02064	0.47	-0.3
2,326,128	-		MIT1002_02064	0.50	-0.5
2,326,164	-		MIT1002_02064	0.53	-0.1
2,326,193	+		MIT1002_02064	0.55	+0.9
2,326,199	+		MIT1002_02064	0.56	-1.1
2,326,199	+		MIT1002_02064	0.56	+0.3
2,326,207	-		MIT1002_02064	0.56	-0.7
2,326,236	+		MIT1002_02064	0.59	+0.4
2,326,419	-		MIT1002_02064	0.72	+2.0