Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01926

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
2,137,334	-				+1.0
2,137,334	-				-0.6
2,137,415	-				-1.1
2,137,421	+				+0.7
2,137,434	-				-2.1
2,137,474	+				+0.6
2,137,474	+				+0.5
2,137,481	+				-0.6
2,137,481	+				+0.5
2,137,481	+				-0.6
2,137,489	-				+0.7
2,137,489	-				-0.3
2,137,599	-		MIT1002_01925	0.19	-0.1
2,137,963	+		MIT1002_01925	0.88	-1.2
2,137,971	-		MIT1002_01925	0.90	-0.1
2,138,093	+				-0.8
2,138,106	-				+11.3
2,138,113	+				+1.5
2,138,246	-				-1.0
2,138,336	+				-0.0
2,138,336	-				+0.5
2,138,344	-				-1.0
2,138,346	-				-0.1
2,138,360	+				-0.6
2,138,362	+				-3.2
2,138,460	+				+1.1
2,138,493	-				-2.5
2,138,493	-				+0.6
2,138,505	+		MIT1002_01926	0.10	-0.5
2,138,569	+		MIT1002_01926	0.13	-0.0
2,138,570	+		MIT1002_01926	0.13	-0.1
2,138,577	-		MIT1002_01926	0.13	-0.4
2,138,577	-		MIT1002_01926	0.13	+0.7
2,138,711	+		MIT1002_01926	0.18	-0.0
2,138,716	+		MIT1002_01926	0.19	-0.5
2,138,716	+		MIT1002_01926	0.19	+0.5
2,138,716	+		MIT1002_01926	0.19	+0.5
2,138,724	-		MIT1002_01926	0.19	+0.6
2,138,833	-		MIT1002_01926	0.23	-0.9
2,138,890	+		MIT1002_01926	0.25	-0.7
2,138,909	+		MIT1002_01926	0.26	+1.3
2,138,909	+		MIT1002_01926	0.26	+0.8
2,138,917	-		MIT1002_01926	0.26	-0.3
2,138,938	+		MIT1002_01926	0.27	-2.4
2,138,965	+		MIT1002_01926	0.28	-0.5
2,138,965	+		MIT1002_01926	0.28	-1.2
2,138,965	+		MIT1002_01926	0.28	-0.0
2,139,053	-		MIT1002_01926	0.32	+0.3
2,139,056	+		MIT1002_01926	0.32	-0.3
2,139,066	+		MIT1002_01926	0.32	-0.3
2,139,156	+		MIT1002_01926	0.35	-1.1
2,139,168	+		MIT1002_01926	0.36	+0.9
2,139,168	+		MIT1002_01926	0.36	+0.5
2,139,176	-		MIT1002_01926	0.36	-0.4
2,139,176	-		MIT1002_01926	0.36	+0.2
2,139,176	-		MIT1002_01926	0.36	-0.5
2,139,176	-		MIT1002_01926	0.36	+0.1
2,139,193	-		MIT1002_01926	0.37	-0.6
2,139,215	-		MIT1002_01926	0.38	+0.1
2,139,272	-		MIT1002_01926	0.40	+2.2
2,139,281	+		MIT1002_01926	0.40	+1.3
2,139,289	-		MIT1002_01926	0.41	+0.5
2,139,289	-		MIT1002_01926	0.41	-0.3
2,139,291	+		MIT1002_01926	0.41	+0.3
2,139,291	+		MIT1002_01926	0.41	+1.6
2,139,297	-		MIT1002_01926	0.41	-1.8
2,139,381	+		MIT1002_01926	0.44	-0.9
2,139,389	-		MIT1002_01926	0.44	-1.0
2,139,472	-		MIT1002_01926	0.48	-1.0
2,139,484	-		MIT1002_01926	0.48	-0.1
2,139,501	-		MIT1002_01926	0.49	+0.1
2,139,511	+		MIT1002_01926	0.49	-1.6
2,139,513	-		MIT1002_01926	0.49	+1.5
2,139,513	-		MIT1002_01926	0.49	+1.0
2,139,513	-		MIT1002_01926	0.49	+1.0
2,139,514	-		MIT1002_01926	0.49	+0.1
2,139,516	+		MIT1002_01926	0.49	+1.2
2,139,519	-		MIT1002_01926	0.49	+1.1
2,139,519	-		MIT1002_01926	0.49	+0.9
2,139,524	-		MIT1002_01926	0.50	-0.3
2,139,554	+		MIT1002_01926	0.51	+1.3
2,139,625	+		MIT1002_01926	0.54	+0.3
2,139,633	-		MIT1002_01926	0.54	+0.6
2,139,774	+		MIT1002_01926	0.59	+0.7
2,139,807	-		MIT1002_01926	0.61	-0.1
2,139,812	-		MIT1002_01926	0.61	+0.7
2,139,877	+		MIT1002_01926	0.63	-0.2
2,139,971	+		MIT1002_01926	0.67	+0.3
2,140,043	+		MIT1002_01926	0.70	+0.6
2,140,046	-		MIT1002_01926	0.70	+0.1
2,140,051	+		MIT1002_01926	0.70	+0.3
2,140,115	+		MIT1002_01926	0.72	-1.8
2,140,228	+		MIT1002_01926	0.77	-1.6
2,140,274	+		MIT1002_01926	0.79	-0.6
2,140,321	-		MIT1002_01926	0.80	+0.8
2,140,440	+		MIT1002_01926	0.85	+1.7
2,140,460	-		MIT1002_01926	0.86	-2.1
2,140,511	-		MIT1002_01926	0.88	-0.5
2,140,560	+		MIT1002_01926	0.90	-0.4
2,140,708	+				+0.7
2,140,801	+				+1.3
2,140,801	+				+0.1
2,140,801	+				+0.7
2,140,809	-				+1.6
2,140,897	-				-0.9
2,140,899	+				-0.1
2,140,899	+				+0.4
2,140,907	-				-0.7