Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01791

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
1,991,910	+		MIT1002_01790	0.31	+0.9
1,991,941	+		MIT1002_01790	0.34	-0.1
1,991,949	-		MIT1002_01790	0.35	+0.2
1,991,949	-		MIT1002_01790	0.35	-0.3
1,991,949	-		MIT1002_01790	0.35	+0.5
1,991,949	-		MIT1002_01790	0.35	-0.9
1,992,014	-		MIT1002_01790	0.41	+2.3
1,992,071	+		MIT1002_01790	0.46	-0.9
1,992,116	+		MIT1002_01790	0.51	+1.0
1,992,132	+		MIT1002_01790	0.52	-0.3
1,992,132	+		MIT1002_01790	0.52	+1.1
1,992,132	+		MIT1002_01790	0.52	+0.4
1,992,132	+		MIT1002_01790	0.52	-0.9
1,992,140	-		MIT1002_01790	0.53	-0.5
1,992,155	-		MIT1002_01790	0.54	+1.3
1,992,170	+		MIT1002_01790	0.56	-0.1
1,992,282	+		MIT1002_01790	0.66	-0.7
1,992,290	-		MIT1002_01790	0.67	-0.6
1,992,290	-		MIT1002_01790	0.67	-1.0
1,992,302	-		MIT1002_01790	0.68	-0.4
1,992,443	-		MIT1002_01790	0.81	+0.1
1,992,567	+				-0.5
1,992,581	+				-0.6
1,992,598	-				+0.7
1,992,609	-				-0.4
1,992,616	+				-0.2
1,992,624	-				+0.7
1,992,624	-				+1.7
1,992,624	-				-2.5
1,992,732	+				-0.3
1,992,813	+				-0.1
1,992,967	+				-0.0
1,992,972	+				-0.9
1,992,988	+				+0.1
1,992,993	-				+0.5
1,992,996	-				-1.0
1,993,108	+		MIT1002_01791	0.13	+0.8
1,993,130	+		MIT1002_01791	0.14	-2.2
1,993,218	+		MIT1002_01791	0.19	+0.9
1,993,268	+		MIT1002_01791	0.22	-1.0
1,993,382	-		MIT1002_01791	0.29	-2.3
1,993,417	+		MIT1002_01791	0.31	-0.2
1,993,460	-		MIT1002_01791	0.34	-0.5
1,993,480	-		MIT1002_01791	0.35	-2.6
1,993,487	-		MIT1002_01791	0.35	+0.3
1,993,533	-		MIT1002_01791	0.38	-1.1
1,993,555	-		MIT1002_01791	0.40	+0.3
1,993,584	+		MIT1002_01791	0.41	+0.3
1,993,627	+		MIT1002_01791	0.44	-0.4
1,993,939	-		MIT1002_01791	0.63	-0.9
1,993,991	+		MIT1002_01791	0.66	+0.2
1,993,991	+		MIT1002_01791	0.66	+0.5
1,993,991	+		MIT1002_01791	0.66	-1.1
1,993,991	+		MIT1002_01791	0.66	-1.1
1,993,991	+		MIT1002_01791	0.66	+1.1
1,993,991	-		MIT1002_01791	0.66	-0.6
1,993,999	-		MIT1002_01791	0.66	-0.7
1,993,999	-		MIT1002_01791	0.66	-0.1
1,994,022	+		MIT1002_01791	0.68	-0.4
1,994,027	-		MIT1002_01791	0.68	-2.0
1,994,053	-		MIT1002_01791	0.69	-1.0
1,994,099	-		MIT1002_01791	0.72	-0.4
1,994,165	+		MIT1002_01791	0.76	-3.7
1,994,165	+		MIT1002_01791	0.76	-1.9
1,994,168	+		MIT1002_01791	0.76	+0.3
1,994,171	-		MIT1002_01791	0.77	-0.7
1,994,208	-		MIT1002_01791	0.79	-0.6
1,994,210	+		MIT1002_01791	0.79	+0.7
1,994,235	-		MIT1002_01791	0.80	-0.6
1,994,387	-		MIT1002_01791	0.89	+1.0
1,994,488	+				+2.0
1,994,496	-				+3.1
1,994,615	+		MIT1002_01792	0.13	-0.5
1,994,669	+		MIT1002_01792	0.26	-1.7
1,994,750	+		MIT1002_01792	0.45	-1.6
1,994,750	+		MIT1002_01792	0.45	-0.7
1,994,758	-		MIT1002_01792	0.47	-0.7
1,994,830	-		MIT1002_01792	0.64	-0.9
1,994,865	-		MIT1002_01792	0.72	+0.2
1,994,892	-		MIT1002_01792	0.79	+0.7
1,994,902	-		MIT1002_01792	0.81	-1.7
1,994,917	+		MIT1002_01792	0.85	-0.9
1,994,956	+				-0.4
1,994,958	+				+0.1
1,994,958	+				+0.8
1,994,980	+				+0.6
1,995,037	+				-1.0
1,995,151	+				+1.9
1,995,185	+				+1.1
1,995,185	+				-1.5
1,995,191	-				-0.1
1,995,191	-				+1.9
1,995,193	-				+0.9
1,995,226	-				+1.4
1,995,239	+				+0.5
1,995,279	+				+2.4
1,995,298	+				-0.8
1,995,379	-		MIT1002_01793	0.13	-0.2
1,995,411	+		MIT1002_01793	0.14	-0.4
1,995,419	-		MIT1002_01793	0.15	+1.1
1,995,460	+		MIT1002_01793	0.17	+0.8
1,995,470	+		MIT1002_01793	0.17	+1.9
1,995,480	+		MIT1002_01793	0.17	-0.6