Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01573

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
1,728,956	-				+1.1
1,729,076	-		MIT1002_01571	0.23	-0.6
1,729,132	+		MIT1002_01571	0.40	-0.3
1,729,140	-		MIT1002_01571	0.42	-0.4
1,729,159	+		MIT1002_01571	0.48	-1.5
1,729,159	+		MIT1002_01571	0.48	-0.4
1,729,159	+		MIT1002_01571	0.48	+0.8
1,729,159	+		MIT1002_01571	0.48	-0.2
1,729,159	+		MIT1002_01571	0.48	-3.0
1,729,165	-		MIT1002_01571	0.50	-0.5
1,729,167	-		MIT1002_01571	0.50	-0.1
1,729,167	-		MIT1002_01571	0.50	-0.1
1,729,237	+		MIT1002_01571	0.72	+0.9
1,729,245	+		MIT1002_01571	0.74	+0.3
1,729,261	-		MIT1002_01571	0.79	+2.1
1,729,265	+		MIT1002_01571	0.80	-0.1
1,729,265	+		MIT1002_01571	0.80	+1.4
1,729,265	+		MIT1002_01571	0.80	-1.0
1,729,273	-		MIT1002_01571	0.83	-1.5
1,729,273	-		MIT1002_01571	0.83	+0.9
1,729,280	-		MIT1002_01571	0.85	+0.5
1,729,393	-				-0.1
1,729,393	-				-2.7
1,729,398	-				-0.1
1,729,466	+		MIT1002_01572	0.16	+0.1
1,729,613	+		MIT1002_01572	0.45	+1.3
1,729,747	-		MIT1002_01572	0.71	-0.1
1,729,786	-		MIT1002_01572	0.79	-1.6
1,729,836	-		MIT1002_01572	0.89	+0.3
1,729,945	-				+0.7
1,730,043	-		MIT1002_01573	0.18	+1.2
1,730,154	-		MIT1002_01573	0.30	+0.4
1,730,156	+		MIT1002_01573	0.31	-1.0
1,730,193	-		MIT1002_01573	0.35	-0.6
1,730,195	-		MIT1002_01573	0.35	-1.1
1,730,232	+		MIT1002_01573	0.39	-0.6
1,730,272	-		MIT1002_01573	0.44	+0.5
1,730,295	-		MIT1002_01573	0.46	-0.2
1,730,363	+		MIT1002_01573	0.54	-2.8
1,730,430	+		MIT1002_01573	0.61	+0.6
1,730,430	+		MIT1002_01573	0.61	-1.4
1,730,460	-		MIT1002_01573	0.64	-2.9
1,730,460	-		MIT1002_01573	0.64	+0.3
1,730,466	+		MIT1002_01573	0.65	+0.8
1,730,471	+		MIT1002_01573	0.66	-0.0
1,730,474	-		MIT1002_01573	0.66	+0.1
1,730,476	+		MIT1002_01573	0.66	-1.4
1,730,476	+		MIT1002_01573	0.66	-1.6
1,730,484	-		MIT1002_01573	0.67	-0.6
1,730,509	-		MIT1002_01573	0.70	-2.4
1,730,527	-		MIT1002_01573	0.72	-0.6
1,730,537	+		MIT1002_01573	0.73	-0.3
1,730,543	-		MIT1002_01573	0.74	-0.2
1,730,589	-		MIT1002_01573	0.79	-0.8
1,730,607	+		MIT1002_01573	0.81	-1.1
1,730,641	+		MIT1002_01573	0.85	+2.6
1,730,670	-		MIT1002_01573	0.88	-0.8
1,730,707	-				-1.0
1,730,726	-				-2.5
1,730,743	-				+1.1
1,730,803	+				-1.6
1,730,808	+				-1.4
1,730,843	-				-1.4
1,730,848	-				+0.5
1,730,849	+				-1.1
1,730,894	-				+0.0
1,730,907	-				-0.9
1,730,955	+				+0.5
1,731,165	+		MIT1002_01574	0.16	-0.5
1,731,165	+		MIT1002_01574	0.16	-1.9
1,731,173	-		MIT1002_01574	0.17	+0.5
1,731,173	-		MIT1002_01574	0.17	-1.2
1,731,173	-		MIT1002_01574	0.17	-0.2
1,731,173	-		MIT1002_01574	0.17	-1.2
1,731,173	-		MIT1002_01574	0.17	-1.4
1,731,173	-		MIT1002_01574	0.17	-2.1
1,731,183	-		MIT1002_01574	0.17	+0.1
1,731,209	+		MIT1002_01574	0.18	-1.9
1,731,453	+		MIT1002_01574	0.29	+0.4
1,731,461	-		MIT1002_01574	0.29	+1.0
1,731,461	-		MIT1002_01574	0.29	-1.7
1,731,461	-		MIT1002_01574	0.29	-0.5
1,731,462	-		MIT1002_01574	0.29	+1.8
1,731,537	+		MIT1002_01574	0.32	+0.1
1,731,537	+		MIT1002_01574	0.32	+1.1
1,731,569	+		MIT1002_01574	0.34	-0.7
1,731,569	+		MIT1002_01574	0.34	-0.0
1,731,571	+		MIT1002_01574	0.34	+3.1
1,731,571	+		MIT1002_01574	0.34	-0.3
1,731,577	-		MIT1002_01574	0.34	-0.3
1,731,579	-		MIT1002_01574	0.34	-0.2
1,731,653	+		MIT1002_01574	0.37	-1.4
1,731,667	+		MIT1002_01574	0.38	-0.1
1,731,716	+		MIT1002_01574	0.40	+3.1
1,731,724	-		MIT1002_01574	0.40	+0.3