Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01490

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
1,646,150	-				-0.0
1,646,166	+				-0.5
1,646,301	-				-0.4
1,646,326	+				-0.9
1,646,326	+				+0.5
1,646,326	+				+0.8
1,646,326	+				-0.1
1,646,326	+				-0.1
1,646,326	+				-1.2
1,646,326	+				-1.4
1,646,326	+				-0.4
1,646,326	+				-0.8
1,646,326	+				-0.0
1,646,334	-				+0.6
1,646,334	-				+0.9
1,646,334	-				-0.8
1,646,334	-				+1.1
1,646,334	-				+0.2
1,646,334	-				-0.2
1,646,334	-				+1.1
1,646,334	-				+1.1
1,646,394	+		MIT1002_01488	0.35	+0.3
1,646,430	+		MIT1002_01488	0.56	-0.5
1,646,430	+		MIT1002_01488	0.56	-0.9
1,646,430	+		MIT1002_01488	0.56	+0.1
1,646,430	+		MIT1002_01488	0.56	+2.7
1,646,438	-		MIT1002_01488	0.61	+0.9
1,646,438	-		MIT1002_01488	0.61	+1.1
1,646,438	-		MIT1002_01488	0.61	+0.1
1,646,438	-		MIT1002_01488	0.61	-0.3
1,646,438	-		MIT1002_01488	0.61	+0.8
1,646,438	-		MIT1002_01488	0.61	-0.7
1,646,440	+		MIT1002_01488	0.62	-0.8
1,646,440	+		MIT1002_01488	0.62	+1.5
1,646,440	+		MIT1002_01488	0.62	-2.6
1,646,440	+		MIT1002_01488	0.62	-0.3
1,646,440	-		MIT1002_01488	0.62	-2.5
1,646,448	-		MIT1002_01488	0.67	+0.8
1,646,448	-		MIT1002_01488	0.67	-1.1
1,646,538	-				+1.6
1,646,540	+				+0.1
1,646,686	+				+0.4
1,646,754	-				+0.4
1,646,816	-				+1.9
1,646,878	+				-2.3
1,646,921	+				+0.1
1,646,929	-				-0.2
1,646,944	-				+0.6
1,646,987	-				-0.3
1,646,999	-				+0.8
1,647,092	+				-0.0
1,647,184	+				+0.4
1,647,278	+				+0.2
1,647,286	-				+1.6
1,647,286	-				-0.3
1,647,286	-				+1.4
1,647,375	-		MIT1002_01490	0.11	-0.6
1,647,404	-		MIT1002_01490	0.12	+0.3
1,647,411	+		MIT1002_01490	0.12	+0.1
1,647,419	-		MIT1002_01490	0.13	+0.2
1,647,442	-		MIT1002_01490	0.13	+0.1
1,647,456	+		MIT1002_01490	0.14	+0.5
1,647,457	+		MIT1002_01490	0.14	-0.4
1,647,486	-		MIT1002_01490	0.15	-0.4
1,647,517	-		MIT1002_01490	0.16	-0.4
1,647,539	+		MIT1002_01490	0.17	+0.1
1,647,572	+		MIT1002_01490	0.19	-2.0
1,647,577	+		MIT1002_01490	0.19	+1.1
1,647,585	+		MIT1002_01490	0.19	+0.1
1,647,691	+		MIT1002_01490	0.23	+2.8
1,647,696	+		MIT1002_01490	0.23	+1.9
1,647,731	-		MIT1002_01490	0.25	+0.0
1,647,803	+		MIT1002_01490	0.28	+0.1
1,647,803	+		MIT1002_01490	0.28	-1.7
1,647,803	+		MIT1002_01490	0.28	+0.3
1,647,803	+		MIT1002_01490	0.28	+2.0
1,647,803	+		MIT1002_01490	0.28	-1.8
1,647,803	+		MIT1002_01490	0.28	+1.3
1,647,803	+		MIT1002_01490	0.28	+0.8
1,647,803	+		MIT1002_01490	0.28	+0.3
1,647,803	+		MIT1002_01490	0.28	+0.8
1,647,811	-		MIT1002_01490	0.28	+0.1
1,647,811	-		MIT1002_01490	0.28	-0.9
1,647,811	-		MIT1002_01490	0.28	+0.5
1,647,811	-		MIT1002_01490	0.28	+0.6
1,647,811	-		MIT1002_01490	0.28	+0.8
1,647,820	+		MIT1002_01490	0.28	+0.3
1,647,828	-		MIT1002_01490	0.28	-0.1
1,647,865	+		MIT1002_01490	0.30	-1.6
1,647,878	+		MIT1002_01490	0.30	-0.2
1,647,894	-		MIT1002_01490	0.31	-0.5
1,647,939	+		MIT1002_01490	0.33	+0.1
1,647,944	+		MIT1002_01490	0.33	-0.4
1,647,944	+		MIT1002_01490	0.33	-0.7
1,647,944	+		MIT1002_01490	0.33	+1.0
1,647,944	+		MIT1002_01490	0.33	+1.0
1,647,952	-		MIT1002_01490	0.33	+1.1
1,648,003	+		MIT1002_01490	0.35	+0.1
1,648,008	+		MIT1002_01490	0.36	-1.5
1,648,033	+		MIT1002_01490	0.36	+0.6
1,648,067	-		MIT1002_01490	0.38	+0.3
1,648,099	+		MIT1002_01490	0.39	+3.0
1,648,141	+		MIT1002_01490	0.41	-2.4
1,648,177	-		MIT1002_01490	0.42	-1.0
1,648,266	-		MIT1002_01490	0.46	-1.1
1,648,285	+		MIT1002_01490	0.46	-1.6
1,648,449	-		MIT1002_01490	0.53	+1.3
1,648,474	+		MIT1002_01490	0.54	+0.2
1,648,485	+		MIT1002_01490	0.54	+1.3
1,648,493	-		MIT1002_01490	0.54	+2.4
1,648,502	+		MIT1002_01490	0.55	+0.4
1,648,502	+		MIT1002_01490	0.55	+0.2
1,648,503	+		MIT1002_01490	0.55	-0.7
1,648,510	-		MIT1002_01490	0.55	-0.1
1,648,511	-		MIT1002_01490	0.55	+0.1
1,648,597	+		MIT1002_01490	0.58	-1.2
1,648,605	-		MIT1002_01490	0.59	-0.1
1,648,640	+		MIT1002_01490	0.60	+2.7
1,648,672	+		MIT1002_01490	0.61	+0.8
1,648,736	+		MIT1002_01490	0.64	-0.2
1,648,736	+		MIT1002_01490	0.64	+0.7
1,648,744	-		MIT1002_01490	0.64	-1.5
1,648,744	-		MIT1002_01490	0.64	-0.8
1,648,744	-		MIT1002_01490	0.64	-2.2
1,648,744	-		MIT1002_01490	0.64	-0.2
1,648,744	-		MIT1002_01490	0.64	+2.1
1,648,749	-		MIT1002_01490	0.64	+2.1
1,648,861	-		MIT1002_01490	0.69	-1.5
1,648,884	-		MIT1002_01490	0.70	-1.6
1,648,897	+		MIT1002_01490	0.70	-0.8
1,648,907	+		MIT1002_01490	0.71	-0.2
1,648,913	+		MIT1002_01490	0.71	+1.7
1,649,009	-		MIT1002_01490	0.75	+0.4
1,649,023	-		MIT1002_01490	0.75	+2.7
1,649,044	+		MIT1002_01490	0.76	-0.5
1,649,052	-		MIT1002_01490	0.76	+0.1
1,649,057	-		MIT1002_01490	0.76	-0.2
1,649,088	+		MIT1002_01490	0.78	-0.6
1,649,096	-		MIT1002_01490	0.78	-0.7
1,649,184	-		MIT1002_01490	0.81	-2.3
1,649,194	+		MIT1002_01490	0.82	-0.5
1,649,210	-		MIT1002_01490	0.82	-0.3
1,649,245	-		MIT1002_01490	0.84	+1.4
1,649,296	-		MIT1002_01490	0.86	+0.1
1,649,301	-		MIT1002_01490	0.86	+0.8
1,649,372	-		MIT1002_01490	0.89	-2.6
1,649,382	-		MIT1002_01490	0.89	-1.2
1,649,447	-				-0.6
1,649,461	+				+1.5
1,649,494	-				+1.0
1,649,500	-				-1.0
1,649,554	+				+2.3
1,649,648	+				-1.5
1,649,679	-				-0.3
1,649,759	-				-0.6
1,649,759	-				+0.0
1,649,857	+		MIT1002_01491	0.23	+0.1
1,649,859	+		MIT1002_01491	0.23	+0.5
1,649,865	-		MIT1002_01491	0.24	+1.2
1,649,865	-		MIT1002_01491	0.24	-0.6
1,650,012	+		MIT1002_01491	0.50	+0.4
1,650,034	-		MIT1002_01491	0.54	-1.0
1,650,062	-		MIT1002_01491	0.59	-0.6
1,650,084	+		MIT1002_01491	0.63	-0.6
1,650,092	-		MIT1002_01491	0.65	+0.5
1,650,131	-		MIT1002_01491	0.72	+0.8
1,650,139	-		MIT1002_01491	0.73	-0.3
1,650,139	-		MIT1002_01491	0.73	+0.8
1,650,160	+		MIT1002_01491	0.77	-0.5
1,650,207	-		MIT1002_01491	0.85	-0.0
1,650,207	-		MIT1002_01491	0.85	+0.3
1,650,260	-				+0.4
1,650,303	-				+0.7
1,650,403	+				-0.9
1,650,414	+				+0.5
1,650,422	-				+1.4
1,650,506	-		MIT1002_01492	0.20	-0.0
1,650,506	-		MIT1002_01492	0.20	-0.8
1,650,508	-		MIT1002_01492	0.20	-0.8
1,650,552	+		MIT1002_01492	0.28	+1.9
1,650,650	-		MIT1002_01492	0.43	+1.0