Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01127

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
1,239,412	-		MIT1002_01126	0.34	+1.2
1,239,497	+		MIT1002_01126	0.40	+0.2
1,239,497	+		MIT1002_01126	0.40	-0.7
1,239,621	+		MIT1002_01126	0.49	+1.0
1,239,634	+		MIT1002_01126	0.50	-0.2
1,239,676	+		MIT1002_01126	0.54	-0.4
1,239,699	+		MIT1002_01126	0.55	-0.2
1,239,706	-		MIT1002_01126	0.56	+2.1
1,239,768	+		MIT1002_01126	0.61	-1.3
1,239,785	-		MIT1002_01126	0.62	-0.2
1,239,842	+		MIT1002_01126	0.66	-0.3
1,239,844	-		MIT1002_01126	0.66	+0.8
1,239,927	-		MIT1002_01126	0.73	-2.1
1,239,976	-		MIT1002_01126	0.76	+2.6
1,240,005	-		MIT1002_01126	0.78	+0.5
1,240,013	+		MIT1002_01126	0.79	+0.7
1,240,013	+		MIT1002_01126	0.79	-0.8
1,240,013	+		MIT1002_01126	0.79	-1.2
1,240,013	+		MIT1002_01126	0.79	+1.0
1,240,021	-		MIT1002_01126	0.80	+0.5
1,240,021	-		MIT1002_01126	0.80	+0.3
1,240,021	-		MIT1002_01126	0.80	-0.1
1,240,021	-		MIT1002_01126	0.80	+0.9
1,240,021	-		MIT1002_01126	0.80	-0.7
1,240,038	+		MIT1002_01126	0.81	-0.7
1,240,091	+		MIT1002_01126	0.85	+1.2
1,240,103	-		MIT1002_01126	0.86	-1.1
1,240,164	+				-0.4
1,240,172	-				-1.5
1,240,223	+				+0.6
1,240,233	+				+0.6
1,240,233	+				-0.9
1,240,233	+				+2.3
1,240,241	-				-1.5
1,240,286	+				+0.7
1,240,286	+				+0.5
1,240,294	-				-0.7
1,240,318	-				+0.3
1,240,326	+				-3.0
1,240,333	-				-0.9
1,240,469	+		MIT1002_01127	0.13	-0.7
1,240,476	+		MIT1002_01127	0.15	+0.5
1,240,477	-		MIT1002_01127	0.15	-0.5
1,240,493	-		MIT1002_01127	0.18	+1.2
1,240,660	-		MIT1002_01127	0.55	-0.7
1,240,660	-		MIT1002_01127	0.55	+0.5
1,240,665	-		MIT1002_01127	0.56	+0.1
1,240,667	+		MIT1002_01127	0.56	+0.1
1,240,675	-		MIT1002_01127	0.58	-1.4
1,240,677	+		MIT1002_01127	0.58	+0.8
1,240,685	-		MIT1002_01127	0.60	+1.4
1,240,707	-		MIT1002_01127	0.65	-0.4
1,240,747	-		MIT1002_01127	0.74	-0.2
1,240,810	-		MIT1002_01127	0.87	-1.6
1,240,865	-				-0.2
1,240,875	+				-0.4
1,240,875	+				-0.0
1,240,934	+				-0.6
1,240,979	+				-0.4
1,240,979	+				-1.1
1,240,987	-				+0.7