Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00850

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
930,719	+		MIT1002_00849	0.69	+0.2
930,719	+		MIT1002_00849	0.69	+1.1
930,727	-		MIT1002_00849	0.69	-0.3
930,727	-		MIT1002_00849	0.69	+0.8
930,727	-		MIT1002_00849	0.69	-0.4
930,775	-		MIT1002_00849	0.71	+0.0
930,829	+		MIT1002_00849	0.73	+2.0
930,829	+		MIT1002_00849	0.73	-2.1
930,837	-		MIT1002_00849	0.73	-0.8
930,837	-		MIT1002_00849	0.73	-0.6
930,837	-		MIT1002_00849	0.73	-1.8
930,912	-		MIT1002_00849	0.76	-1.8
930,951	+		MIT1002_00849	0.78	+0.8
930,969	-		MIT1002_00849	0.78	-1.5
930,978	-		MIT1002_00849	0.79	+1.9
931,181	+		MIT1002_00849	0.87	+0.0
931,255	-		MIT1002_00849	0.90	+0.0
931,258	+		MIT1002_00849	0.90	+1.3
931,258	+		MIT1002_00849	0.90	+0.3
931,258	+		MIT1002_00849	0.90	-0.3
931,266	-				+0.2
931,266	-				-1.3
931,271	+				-0.1
931,285	+				-2.1
931,285	+				+0.6
931,285	+				+0.2
931,285	-				+1.8
931,285	-				+0.7
931,287	+				-0.2
931,287	+				+0.8
931,293	-				-0.6
931,293	-				-0.8
931,295	-				+2.3
931,389	-				-1.5
931,407	+				-2.1
931,415	+				-0.4
931,415	+				-0.2
931,415	+				+0.3
931,423	-				+0.6
931,423	-				-2.2
931,423	-				+0.8
931,491	+				-0.8
931,499	-				-1.9
931,499	-				+0.6
931,499	-				+0.9
931,548	-				+1.0
931,603	+				+0.3
931,624	-				+0.3
931,685	-				+1.0
931,685	-				-0.3
931,685	-				+0.4
931,693	-				+0.3
931,704	+				-0.6
931,712	-				+0.3
931,712	-				-0.5
931,714	+				+1.2
931,714	+				-0.5
931,722	-				-0.7
931,722	-				+0.2
931,722	-				-0.1
931,722	-				-0.8
931,767	+				+0.0
931,776	+				+1.5
932,023	+		MIT1002_00850	0.23	+0.1
932,053	+		MIT1002_00850	0.25	+0.8
932,089	+		MIT1002_00850	0.28	-2.0
932,097	-		MIT1002_00850	0.28	-0.1
932,221	+		MIT1002_00850	0.37	+0.0
932,226	-		MIT1002_00850	0.37	+0.8
932,230	-		MIT1002_00850	0.37	+0.9
932,277	+		MIT1002_00850	0.41	-2.1
932,329	+		MIT1002_00850	0.44	+3.3
932,336	-		MIT1002_00850	0.45	+0.2
932,343	+		MIT1002_00850	0.45	-1.4
932,351	-		MIT1002_00850	0.46	-0.2
932,366	+		MIT1002_00850	0.47	+0.6
932,366	-		MIT1002_00850	0.47	-2.0
932,383	+		MIT1002_00850	0.48	+0.8
932,451	+		MIT1002_00850	0.52	-1.0
932,469	-		MIT1002_00850	0.54	-0.7
932,474	+		MIT1002_00850	0.54	+2.0
932,474	+		MIT1002_00850	0.54	-0.2
932,474	+		MIT1002_00850	0.54	+2.1
932,482	-		MIT1002_00850	0.55	+0.1
932,504	+		MIT1002_00850	0.56	-1.5
932,715	-		MIT1002_00850	0.70	-1.3
932,818	+		MIT1002_00850	0.78	+0.1
932,828	+		MIT1002_00850	0.78	-1.5
932,828	+		MIT1002_00850	0.78	+0.5
932,912	-		MIT1002_00850	0.84	+0.6
932,920	-		MIT1002_00850	0.84	+2.1
932,931	-		MIT1002_00850	0.85	+0.0
932,931	-		MIT1002_00850	0.85	+0.9
932,940	-		MIT1002_00850	0.86	-2.7
932,963	+		MIT1002_00850	0.87	+1.8
932,971	-		MIT1002_00850	0.88	+0.5
933,042	-				+0.0
933,042	-				-0.0
933,124	+				-0.8
933,136	+				+1.4
933,140	+				+0.9
933,144	-				-0.4
933,148	+				-0.1
933,637	+				+0.1
933,637	+				-0.9
933,637	+				+0.3
933,645	-				-1.2
933,735	+				+0.8
933,743	-				-0.7
933,774	+				-0.1
933,789	+				+0.3
933,891	+		MIT1002_00853	0.12	-0.4
933,896	+		MIT1002_00853	0.12	+1.0
933,918	-		MIT1002_00853	0.13	+0.1
933,918	-		MIT1002_00853	0.13	+2.7
933,928	-		MIT1002_00853	0.13	+1.8
933,954	+		MIT1002_00853	0.14	+1.1
933,973	-		MIT1002_00853	0.15	+0.3
934,041	+		MIT1002_00853	0.18	-0.4
934,049	-		MIT1002_00853	0.18	-0.5
934,049	-		MIT1002_00853	0.18	+0.6
934,049	-		MIT1002_00853	0.18	-2.1
934,111	-		MIT1002_00853	0.21	+0.7
934,124	+		MIT1002_00853	0.21	-1.0
934,145	+		MIT1002_00853	0.22	+0.0