Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00751 and MPMX19_00752 are separated by 68 nucleotides MPMX19_00752 and MPMX19_00753 are separated by 224 nucleotides MPMX19_00753 and MPMX19_00754 are separated by 120 nucleotides MPMX19_00754 and MPMX19_00755 are separated by 9 nucleotides
MPMX19_00751: MPMX19_00751 - 50S ribosomal protein L3 glutamine methyltransferase, at 767,751 to 768,683
_00751
MPMX19_00752: MPMX19_00752 - putative protein YfgD, at 768,752 to 769,093
_00752
MPMX19_00753: MPMX19_00753 - D-3-phosphoglycerate dehydrogenase, at 769,318 to 770,562
_00753
MPMX19_00754: MPMX19_00754 - hypothetical protein, at 770,683 to 771,405
_00754
MPMX19_00755: MPMX19_00755 - hypothetical protein, at 771,415 to 771,774
_00755
Position (kb) 769
770
771 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 768.334 kb on + strand, within MPMX19_00751 at 768.334 kb on + strand, within MPMX19_00751 at 768.334 kb on + strand, within MPMX19_00751 at 768.334 kb on + strand, within MPMX19_00751 at 768.334 kb on + strand, within MPMX19_00751 at 768.334 kb on + strand, within MPMX19_00751 at 768.334 kb on + strand, within MPMX19_00751 at 768.334 kb on + strand, within MPMX19_00751 at 768.334 kb on + strand, within MPMX19_00751 at 768.334 kb on + strand, within MPMX19_00751 at 768.334 kb on + strand, within MPMX19_00751 at 768.334 kb on + strand, within MPMX19_00751 at 768.334 kb on + strand, within MPMX19_00751 at 768.335 kb on - strand, within MPMX19_00751 at 768.335 kb on - strand, within MPMX19_00751 at 768.335 kb on - strand, within MPMX19_00751 at 768.335 kb on - strand, within MPMX19_00751 at 768.335 kb on - strand, within MPMX19_00751 at 768.335 kb on - strand, within MPMX19_00751 at 768.335 kb on - strand, within MPMX19_00751 at 768.335 kb on - strand, within MPMX19_00751 at 768.335 kb on - strand, within MPMX19_00751 at 768.335 kb on - strand, within MPMX19_00751 at 768.335 kb on - strand, within MPMX19_00751 at 768.335 kb on - strand, within MPMX19_00751 at 768.335 kb on - strand, within MPMX19_00751 at 768.335 kb on - strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.367 kb on + strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.368 kb on - strand, within MPMX19_00751 at 768.386 kb on + strand, within MPMX19_00751 at 768.386 kb on + strand, within MPMX19_00751 at 768.386 kb on + strand, within MPMX19_00751 at 768.386 kb on + strand, within MPMX19_00751 at 768.387 kb on - strand, within MPMX19_00751 at 768.387 kb on - strand, within MPMX19_00751 at 768.387 kb on - strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.388 kb on + strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.389 kb on - strand, within MPMX19_00751 at 768.406 kb on + strand, within MPMX19_00751 at 768.406 kb on + strand, within MPMX19_00751 at 768.406 kb on + strand, within MPMX19_00751 at 768.406 kb on + strand, within MPMX19_00751 at 768.406 kb on + strand, within MPMX19_00751 at 768.406 kb on + strand, within MPMX19_00751 at 768.406 kb on + strand, within MPMX19_00751 at 768.406 kb on + strand, within MPMX19_00751 at 768.407 kb on - strand, within MPMX19_00751 at 768.407 kb on - strand, within MPMX19_00751 at 768.407 kb on - strand, within MPMX19_00751 at 768.407 kb on - strand, within MPMX19_00751 at 768.407 kb on - strand, within MPMX19_00751 at 768.407 kb on - strand, within MPMX19_00751 at 768.407 kb on - strand, within MPMX19_00751 at 768.493 kb on + strand, within MPMX19_00751 at 768.493 kb on + strand, within MPMX19_00751 at 768.494 kb on - strand, within MPMX19_00751 at 768.494 kb on - strand, within MPMX19_00751 at 768.580 kb on + strand, within MPMX19_00751 at 768.581 kb on - strand, within MPMX19_00751 at 768.616 kb on + strand at 768.911 kb on - strand, within MPMX19_00752 at 768.993 kb on + strand, within MPMX19_00752 at 768.994 kb on - strand, within MPMX19_00752 at 768.994 kb on - strand, within MPMX19_00752 at 768.994 kb on - strand, within MPMX19_00752 at 769.074 kb on + strand at 769.074 kb on + strand at 769.074 kb on + strand at 769.074 kb on + strand at 769.074 kb on + strand at 769.074 kb on + strand at 769.074 kb on + strand at 769.074 kb on + strand at 769.074 kb on + strand at 769.074 kb on + strand at 769.074 kb on + strand at 769.074 kb on + strand at 769.074 kb on + strand at 769.074 kb on + strand at 769.075 kb on - strand at 769.075 kb on - strand at 769.075 kb on - strand at 769.075 kb on - strand at 769.075 kb on - strand at 769.075 kb on - strand at 769.075 kb on - strand at 769.075 kb on - strand at 769.075 kb on - strand at 769.075 kb on - strand at 769.075 kb on - strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.130 kb on + strand at 769.131 kb on - strand at 769.131 kb on - strand at 769.131 kb on - strand at 769.131 kb on - strand at 769.131 kb on - strand at 769.131 kb on - strand at 769.131 kb on - strand at 769.131 kb on - strand at 769.221 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.612 kb on + strand at 770.613 kb on - strand at 770.613 kb on - strand at 770.613 kb on - strand at 770.613 kb on - strand at 770.613 kb on - strand at 770.613 kb on - strand at 770.651 kb on + strand at 770.651 kb on + strand at 770.651 kb on + strand at 770.652 kb on - strand at 770.652 kb on - strand at 770.652 kb on - strand at 770.652 kb on - strand at 770.652 kb on - strand at 770.652 kb on - strand at 770.923 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.977 kb on + strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 770.978 kb on - strand, within MPMX19_00754 at 771.169 kb on - strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.319 kb on + strand, within MPMX19_00754 at 771.320 kb on - strand, within MPMX19_00754 at 771.320 kb on - strand, within MPMX19_00754 at 771.320 kb on - strand, within MPMX19_00754 at 771.320 kb on - strand, within MPMX19_00754 at 771.320 kb on - strand, within MPMX19_00754 at 771.320 kb on - strand, within MPMX19_00754 at 771.320 kb on - strand, within MPMX19_00754 at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.361 kb on + strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand at 771.362 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum remove 768,334 + MPMX19_00751 0.62 -0.4 768,334 + MPMX19_00751 0.62 -1.5 768,334 + MPMX19_00751 0.62 -2.2 768,334 + MPMX19_00751 0.62 +0.1 768,334 + MPMX19_00751 0.62 -0.3 768,334 + MPMX19_00751 0.62 +0.6 768,334 + MPMX19_00751 0.62 -1.5 768,334 + MPMX19_00751 0.62 -1.6 768,334 + MPMX19_00751 0.62 -0.5 768,334 + MPMX19_00751 0.62 -0.1 768,334 + MPMX19_00751 0.62 -0.3 768,334 + MPMX19_00751 0.62 -1.1 768,334 + MPMX19_00751 0.62 -0.2 768,335 - MPMX19_00751 0.63 -1.1 768,335 - MPMX19_00751 0.63 +0.3 768,335 - MPMX19_00751 0.63 +0.6 768,335 - MPMX19_00751 0.63 -0.2 768,335 - MPMX19_00751 0.63 +0.8 768,335 - MPMX19_00751 0.63 +1.0 768,335 - MPMX19_00751 0.63 -1.2 768,335 - MPMX19_00751 0.63 -1.3 768,335 - MPMX19_00751 0.63 +1.0 768,335 - MPMX19_00751 0.63 -0.9 768,335 - MPMX19_00751 0.63 -1.2 768,335 - MPMX19_00751 0.63 +0.1 768,335 - MPMX19_00751 0.63 -1.4 768,335 - MPMX19_00751 0.63 -0.8 768,367 + MPMX19_00751 0.66 +1.1 768,367 + MPMX19_00751 0.66 +0.1 768,367 + MPMX19_00751 0.66 +0.5 768,367 + MPMX19_00751 0.66 -0.1 768,367 + MPMX19_00751 0.66 -0.9 768,367 + MPMX19_00751 0.66 +0.0 768,367 + MPMX19_00751 0.66 +0.1 768,367 + MPMX19_00751 0.66 +0.1 768,367 + MPMX19_00751 0.66 -0.3 768,367 + MPMX19_00751 0.66 -2.2 768,367 + MPMX19_00751 0.66 -1.3 768,367 + MPMX19_00751 0.66 -0.3 768,367 + MPMX19_00751 0.66 +0.5 768,367 + MPMX19_00751 0.66 -0.5 768,367 + MPMX19_00751 0.66 +0.5 768,367 + MPMX19_00751 0.66 -0.5 768,367 + MPMX19_00751 0.66 -0.1 768,367 + MPMX19_00751 0.66 -0.2 768,367 + MPMX19_00751 0.66 -0.1 768,367 + MPMX19_00751 0.66 -1.6 768,367 + MPMX19_00751 0.66 +0.8 768,367 + MPMX19_00751 0.66 +0.1 768,367 + MPMX19_00751 0.66 -1.7 768,367 + MPMX19_00751 0.66 +0.3 768,367 + MPMX19_00751 0.66 -1.0 768,367 + MPMX19_00751 0.66 -0.1 768,367 + MPMX19_00751 0.66 -0.2 768,368 - MPMX19_00751 0.66 -0.5 768,368 - MPMX19_00751 0.66 -0.5 768,368 - MPMX19_00751 0.66 -0.4 768,368 - MPMX19_00751 0.66 +0.1 768,368 - MPMX19_00751 0.66 -0.8 768,368 - MPMX19_00751 0.66 -0.3 768,368 - MPMX19_00751 0.66 -1.0 768,368 - MPMX19_00751 0.66 -0.2 768,368 - MPMX19_00751 0.66 -0.2 768,368 - MPMX19_00751 0.66 -0.7 768,368 - MPMX19_00751 0.66 -0.2 768,368 - MPMX19_00751 0.66 -0.5 768,368 - MPMX19_00751 0.66 -0.7 768,368 - MPMX19_00751 0.66 -1.5 768,368 - MPMX19_00751 0.66 -0.5 768,368 - MPMX19_00751 0.66 -0.7 768,368 - MPMX19_00751 0.66 +0.8 768,368 - MPMX19_00751 0.66 -0.3 768,368 - MPMX19_00751 0.66 -0.8 768,368 - MPMX19_00751 0.66 +1.5 768,368 - MPMX19_00751 0.66 -1.4 768,368 - MPMX19_00751 0.66 -0.9 768,368 - MPMX19_00751 0.66 -1.6 768,368 - MPMX19_00751 0.66 +0.0 768,368 - MPMX19_00751 0.66 -0.4 768,368 - MPMX19_00751 0.66 +1.5 768,368 - MPMX19_00751 0.66 +0.5 768,368 - MPMX19_00751 0.66 -0.1 768,368 - MPMX19_00751 0.66 -2.2 768,368 - MPMX19_00751 0.66 +0.1 768,368 - MPMX19_00751 0.66 -0.2 768,368 - 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Or see this region's nucleotide sequence