Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF818 and GFF819 are separated by 15 nucleotides GFF819 and GFF820 are separated by 152 nucleotides
GFF818 - hypothetical protein, at 875,341 to 885,402
GFF818
GFF819 - hypothetical protein, at 885,418 to 885,867
GFF819
GFF820 - hypothetical protein, at 886,020 to 886,511
GFF820
Position (kb)
885
886 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 884.602 kb on + strand at 884.602 kb on + strand at 884.603 kb on - strand at 884.603 kb on - strand at 884.603 kb on - strand at 884.644 kb on + strand at 884.645 kb on - strand at 884.725 kb on + strand at 884.920 kb on + strand at 884.920 kb on + strand at 884.920 kb on + strand at 884.921 kb on - strand at 884.950 kb on + strand at 884.951 kb on - strand at 884.951 kb on - strand at 884.971 kb on + strand at 884.974 kb on + strand at 884.974 kb on + strand at 884.974 kb on + strand at 884.974 kb on + strand at 884.975 kb on - strand at 884.975 kb on - strand at 884.975 kb on - strand at 885.154 kb on + strand at 885.154 kb on + strand at 885.154 kb on + strand at 885.154 kb on + strand at 885.155 kb on - strand at 885.155 kb on - strand at 885.155 kb on - strand at 885.334 kb on + strand at 885.334 kb on + strand at 885.335 kb on - strand at 885.335 kb on - strand at 885.342 kb on + strand at 885.343 kb on - strand at 885.343 kb on - strand at 885.441 kb on - strand at 885.535 kb on + strand, within GFF819 at 885.536 kb on - strand, within GFF819 at 886.016 kb on + strand at 886.665 kb on + strand at 886.665 kb on + strand at 886.802 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 884,602 + -0.1 884,602 + +0.8 884,603 - -0.5 884,603 - -0.8 884,603 - +0.6 884,644 + -0.3 884,645 - +0.2 884,725 + +0.1 884,920 + -0.3 884,920 + -0.0 884,920 + -0.7 884,921 - -0.6 884,950 + -2.5 884,951 - -0.6 884,951 - +0.5 884,971 + -0.1 884,974 + +2.3 884,974 + -0.3 884,974 + +0.2 884,974 + -0.2 884,975 - +1.3 884,975 - -0.3 884,975 - +0.4 885,154 + +1.1 885,154 + -0.2 885,154 + -0.7 885,154 + -1.3 885,155 - -1.4 885,155 - +0.6 885,155 - -0.0 885,334 + -1.6 885,334 + -0.2 885,335 - -0.2 885,335 - +1.8 885,342 + -0.1 885,343 - -0.2 885,343 - -0.3 885,441 - +1.1 885,535 + GFF819 0.26 +0.7 885,536 - GFF819 0.26 +0.7 886,016 + +0.8 886,665 + +0.4 886,665 + +0.9 886,802 + -0.2
Or see this region's nucleotide sequence