Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF778 and GFF779 are separated by 73 nucleotides GFF779 and GFF780 are separated by 192 nucleotides
GFF778 - hypothetical protein, at 830,209 to 831,321
GFF778
GFF779 - Alpha-ketoglutarate-dependent sulfate ester dioxygenase, at 831,395 to 832,363
GFF779
GFF780 - hypothetical protein, at 832,556 to 834,181
GFF780
Position (kb) 831
832
833 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 830.414 kb on + strand, within GFF778 at 830.414 kb on + strand, within GFF778 at 830.414 kb on + strand, within GFF778 at 830.414 kb on + strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.627 kb on + strand, within GFF778 at 830.627 kb on + strand, within GFF778 at 830.628 kb on - strand, within GFF778 at 830.628 kb on - strand, within GFF778 at 830.673 kb on - strand, within GFF778 at 830.673 kb on - strand, within GFF778 at 830.711 kb on + strand, within GFF778 at 830.712 kb on - strand, within GFF778 at 830.712 kb on - strand, within GFF778 at 831.152 kb on + strand, within GFF778 at 831.152 kb on + strand, within GFF778 at 831.153 kb on - strand, within GFF778 at 831.153 kb on - strand, within GFF778 at 831.153 kb on - strand, within GFF778 at 831.153 kb on - strand, within GFF778 at 831.516 kb on + strand, within GFF779 at 831.532 kb on - strand, within GFF779 at 831.633 kb on + strand, within GFF779 at 831.633 kb on + strand, within GFF779 at 831.634 kb on - strand, within GFF779 at 831.822 kb on + strand, within GFF779 at 831.822 kb on + strand, within GFF779 at 831.823 kb on - strand, within GFF779 at 831.828 kb on + strand, within GFF779 at 831.828 kb on + strand, within GFF779 at 831.828 kb on + strand, within GFF779 at 831.828 kb on + strand, within GFF779 at 831.895 kb on - strand, within GFF779 at 831.895 kb on - strand, within GFF779 at 832.427 kb on + strand at 832.427 kb on + strand at 832.428 kb on - strand at 832.482 kb on - strand at 832.742 kb on + strand, within GFF780 at 832.743 kb on - strand, within GFF780 at 832.743 kb on - strand, within GFF780 at 832.943 kb on + strand, within GFF780 at 832.944 kb on - strand, within GFF780 at 832.945 kb on + strand, within GFF780 at 832.945 kb on + strand, within GFF780 at 832.945 kb on + strand, within GFF780 at 832.946 kb on - strand, within GFF780 at 832.946 kb on - strand, within GFF780 at 833.231 kb on + strand, within GFF780 at 833.231 kb on + strand, within GFF780 at 833.231 kb on + strand, within GFF780 at 833.232 kb on - strand, within GFF780
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 830,414 + GFF778 0.18 -0.6 830,414 + GFF778 0.18 +1.1 830,414 + GFF778 0.18 -0.2 830,414 + GFF778 0.18 -1.0 830,415 - GFF778 0.19 -0.3 830,415 - GFF778 0.19 -0.7 830,415 - GFF778 0.19 -0.1 830,415 - GFF778 0.19 +1.5 830,415 - GFF778 0.19 +0.1 830,415 - GFF778 0.19 -0.0 830,627 + GFF778 0.38 -1.1 830,627 + GFF778 0.38 -0.3 830,628 - GFF778 0.38 -0.4 830,628 - GFF778 0.38 -0.5 830,673 - GFF778 0.42 +1.7 830,673 - GFF778 0.42 +1.1 830,711 + GFF778 0.45 -1.0 830,712 - GFF778 0.45 +0.4 830,712 - GFF778 0.45 +0.1 831,152 + GFF778 0.85 -0.9 831,152 + GFF778 0.85 +0.1 831,153 - GFF778 0.85 -0.1 831,153 - GFF778 0.85 +0.7 831,153 - GFF778 0.85 +1.5 831,153 - GFF778 0.85 +0.2 831,516 + GFF779 0.12 +0.0 831,532 - GFF779 0.14 +1.8 831,633 + GFF779 0.25 -0.8 831,633 + GFF779 0.25 -0.0 831,634 - GFF779 0.25 -0.4 831,822 + GFF779 0.44 +0.1 831,822 + GFF779 0.44 -0.8 831,823 - GFF779 0.44 -0.6 831,828 + GFF779 0.45 -0.3 831,828 + GFF779 0.45 -0.6 831,828 + GFF779 0.45 -1.0 831,828 + GFF779 0.45 +1.4 831,895 - GFF779 0.52 +0.4 831,895 - GFF779 0.52 +0.3 832,427 + +0.9 832,427 + +0.1 832,428 - +0.1 832,482 - -0.5 832,742 + GFF780 0.11 +0.6 832,743 - GFF780 0.12 -0.2 832,743 - GFF780 0.12 -0.9 832,943 + GFF780 0.24 -3.1 832,944 - GFF780 0.24 +0.5 832,945 + GFF780 0.24 +0.2 832,945 + GFF780 0.24 -1.2 832,945 + GFF780 0.24 +1.2 832,946 - GFF780 0.24 -1.1 832,946 - GFF780 0.24 -0.3 833,231 + GFF780 0.42 -0.8 833,231 + GFF780 0.42 -0.4 833,231 + GFF780 0.42 +0.4 833,232 - GFF780 0.42 -0.5
Or see this region's nucleotide sequence