Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF754 and GFF755 are separated by 232 nucleotides GFF755 and GFF756 are separated by 9 nucleotides GFF756 and GFF757 are separated by 134 nucleotides
GFF754 - hypothetical protein, at 806,731 to 807,615
GFF754
GFF755 - hypothetical protein, at 807,848 to 808,501
GFF755
GFF756 - hypothetical protein, at 808,511 to 809,347
GFF756
GFF757 - tRNA-dihydrouridine(20/20a) synthase, at 809,482 to 810,474
GFF757
Position (kb) 808
809
810 Strain fitness (log2 ratio) -2
-1
0
1
2 at 807.616 kb on + strand at 807.638 kb on + strand at 807.639 kb on - strand at 807.744 kb on + strand at 807.744 kb on + strand at 807.745 kb on - strand at 807.745 kb on - strand at 807.986 kb on + strand, within GFF755 at 807.987 kb on - strand, within GFF755 at 807.987 kb on - strand, within GFF755 at 808.007 kb on + strand, within GFF755 at 808.007 kb on + strand, within GFF755 at 808.101 kb on - strand, within GFF755 at 808.101 kb on - strand, within GFF755 at 808.258 kb on + strand, within GFF755 at 808.259 kb on - strand, within GFF755 at 808.262 kb on + strand, within GFF755 at 808.263 kb on - strand, within GFF755 at 808.620 kb on + strand, within GFF756 at 808.677 kb on + strand, within GFF756 at 808.677 kb on + strand, within GFF756 at 808.731 kb on + strand, within GFF756 at 808.809 kb on + strand, within GFF756 at 808.809 kb on + strand, within GFF756 at 808.810 kb on - strand, within GFF756 at 808.822 kb on + strand, within GFF756 at 808.823 kb on - strand, within GFF756 at 808.823 kb on - strand, within GFF756 at 808.823 kb on - strand, within GFF756 at 808.888 kb on - strand, within GFF756 at 808.888 kb on - strand, within GFF756 at 809.218 kb on - strand, within GFF756 at 809.406 kb on + strand at 809.406 kb on + strand at 809.406 kb on + strand at 809.406 kb on + strand at 809.407 kb on - strand at 809.407 kb on - strand at 809.450 kb on - strand at 809.676 kb on + strand, within GFF757 at 809.677 kb on - strand, within GFF757 at 809.677 kb on - strand, within GFF757 at 809.678 kb on + strand, within GFF757 at 809.679 kb on - strand, within GFF757 at 809.679 kb on - strand, within GFF757 at 809.710 kb on - strand, within GFF757 at 809.710 kb on - strand, within GFF757 at 809.777 kb on + strand, within GFF757 at 809.909 kb on + strand, within GFF757 at 809.909 kb on + strand, within GFF757 at 809.909 kb on + strand, within GFF757 at 809.910 kb on - strand, within GFF757 at 810.199 kb on + strand, within GFF757 at 810.199 kb on + strand, within GFF757
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 807,616 + +1.2 807,638 + +0.2 807,639 - -0.5 807,744 + +0.6 807,744 + -0.0 807,745 - -2.1 807,745 - -1.1 807,986 + GFF755 0.21 +0.7 807,987 - GFF755 0.21 -0.3 807,987 - GFF755 0.21 -1.1 808,007 + GFF755 0.24 +0.6 808,007 + GFF755 0.24 +0.7 808,101 - GFF755 0.39 -1.5 808,101 - GFF755 0.39 +0.2 808,258 + GFF755 0.63 +0.3 808,259 - GFF755 0.63 +1.2 808,262 + GFF755 0.63 -1.1 808,263 - GFF755 0.63 -0.3 808,620 + GFF756 0.13 +1.2 808,677 + GFF756 0.20 +0.9 808,677 + GFF756 0.20 +0.6 808,731 + GFF756 0.26 -0.3 808,809 + GFF756 0.36 -0.3 808,809 + GFF756 0.36 -0.7 808,810 - GFF756 0.36 +0.2 808,822 + GFF756 0.37 +0.9 808,823 - GFF756 0.37 +0.0 808,823 - GFF756 0.37 +0.5 808,823 - GFF756 0.37 +0.3 808,888 - GFF756 0.45 -0.2 808,888 - GFF756 0.45 -0.4 809,218 - GFF756 0.84 +0.4 809,406 + -0.9 809,406 + +0.7 809,406 + +0.2 809,406 + -0.1 809,407 - -0.1 809,407 - +0.2 809,450 - -0.4 809,676 + GFF757 0.20 -0.4 809,677 - GFF757 0.20 -1.4 809,677 - GFF757 0.20 +1.1 809,678 + GFF757 0.20 +0.4 809,679 - GFF757 0.20 +0.2 809,679 - GFF757 0.20 -0.8 809,710 - GFF757 0.23 -0.7 809,710 - GFF757 0.23 +0.3 809,777 + GFF757 0.30 +0.2 809,909 + GFF757 0.43 +0.7 809,909 + GFF757 0.43 +0.3 809,909 + GFF757 0.43 +0.5 809,910 - GFF757 0.43 -0.9 810,199 + GFF757 0.72 -0.7 810,199 + GFF757 0.72 +2.1
Or see this region's nucleotide sequence