Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF588 and GFF589 are separated by 116 nucleotides GFF589 and GFF590 are separated by 104 nucleotides GFF590 and GFF591 are separated by 33 nucleotides
GFF588 - Enolase, at 628,838 to 630,121
GFF588
GFF589 - L-carnitine dehydrogenase, at 630,238 to 631,275
GFF589
GFF590 - hypothetical protein, at 631,380 to 632,051
GFF590
GFF591 - Aspartate/glutamate leucyltransferase, at 632,085 to 632,834
GFF591
Position (kb) 630
631
632 Strain fitness (log2 ratio) -2
-1
0
1 at 630.160 kb on + strand at 630.161 kb on - strand at 630.351 kb on + strand, within GFF589 at 630.351 kb on + strand, within GFF589 at 630.351 kb on + strand, within GFF589 at 630.352 kb on - strand, within GFF589 at 630.758 kb on + strand, within GFF589 at 630.758 kb on + strand, within GFF589 at 630.758 kb on + strand, within GFF589 at 630.758 kb on + strand, within GFF589 at 631.534 kb on + strand, within GFF590 at 631.535 kb on - strand, within GFF590 at 631.623 kb on - strand, within GFF590 at 631.693 kb on + strand, within GFF590 at 631.694 kb on - strand, within GFF590 at 632.087 kb on - strand at 632.189 kb on - strand, within GFF591 at 632.195 kb on - strand, within GFF591 at 632.243 kb on - strand, within GFF591
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 630,160 + +0.1 630,161 - +0.5 630,351 + GFF589 0.11 +0.3 630,351 + GFF589 0.11 -0.5 630,351 + GFF589 0.11 +1.1 630,352 - GFF589 0.11 -0.5 630,758 + GFF589 0.50 -0.3 630,758 + GFF589 0.50 -1.1 630,758 + GFF589 0.50 -0.4 630,758 + GFF589 0.50 +0.5 631,534 + GFF590 0.23 -0.5 631,535 - GFF590 0.23 +0.3 631,623 - GFF590 0.36 +1.0 631,693 + GFF590 0.47 +0.1 631,694 - GFF590 0.47 -0.5 632,087 - -0.4 632,189 - GFF591 0.14 -0.9 632,195 - GFF591 0.15 -0.3 632,243 - GFF591 0.21 -2.2
Or see this region's nucleotide sequence