Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF549 and GFF550 overlap by 4 nucleotides GFF550 and GFF551 are separated by 144 nucleotides GFF551 and GFF552 are separated by 4 nucleotides GFF552 and GFF553 overlap by 4 nucleotides
GFF549 - hypothetical protein, at 590,586 to 591,839
GFF549
GFF550 - hypothetical protein, at 591,836 to 592,222
GFF550
GFF551 - Beta-hexosaminidase, at 592,367 to 593,380
GFF551
GFF552 - Segregation and condensation protein A, at 593,385 to 594,254
GFF552
GFF553 - Segregation and condensation protein B, at 594,251 to 594,994
GFF553
Position (kb) 592
593
594 Strain fitness (log2 ratio) -1
0
1 at 591.752 kb on - strand at 591.978 kb on + strand, within GFF550 at 592.061 kb on - strand, within GFF550 at 592.215 kb on + strand at 592.215 kb on + strand at 592.216 kb on - strand at 592.216 kb on - strand at 592.262 kb on + strand at 592.355 kb on + strand at 592.706 kb on + strand, within GFF551 at 593.024 kb on + strand, within GFF551 at 593.024 kb on + strand, within GFF551
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 591,752 - -0.5 591,978 + GFF550 0.37 -0.9 592,061 - GFF550 0.58 -0.2 592,215 + -0.1 592,215 + +0.9 592,216 - +0.1 592,216 - +0.4 592,262 + +1.2 592,355 + -0.8 592,706 + GFF551 0.33 +0.8 593,024 + GFF551 0.65 +1.7 593,024 + GFF551 0.65 +1.7
Or see this region's nucleotide sequence