Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF547 and GFF548 are separated by 24 nucleotides GFF548 and GFF549 are separated by 83 nucleotides
GFF547 - ATM1-type heavy metal exporter, at 588,085 to 590,040
GFF547
GFF548 - putative protein, at 590,065 to 590,502
GFF548
GFF549 - hypothetical protein, at 590,586 to 591,839
GFF549
Position (kb) 590
591 Strain fitness (log2 ratio) -2
-1
0
1
2 at 589.235 kb on - strand, within GFF547 at 589.357 kb on + strand, within GFF547 at 589.357 kb on + strand, within GFF547 at 589.358 kb on - strand, within GFF547 at 589.358 kb on - strand, within GFF547 at 589.358 kb on - strand, within GFF547 at 589.358 kb on - strand, within GFF547 at 589.455 kb on + strand, within GFF547 at 589.483 kb on + strand, within GFF547 at 589.483 kb on + strand, within GFF547 at 589.483 kb on + strand, within GFF547 at 589.484 kb on - strand, within GFF547 at 589.484 kb on - strand, within GFF547 at 589.719 kb on + strand, within GFF547 at 589.891 kb on + strand at 589.891 kb on + strand at 589.892 kb on - strand at 589.892 kb on - strand at 590.120 kb on + strand, within GFF548 at 590.120 kb on + strand, within GFF548 at 590.307 kb on - strand, within GFF548 at 590.307 kb on - strand, within GFF548 at 590.424 kb on - strand, within GFF548 at 590.424 kb on - strand, within GFF548 at 590.424 kb on - strand, within GFF548 at 590.494 kb on - strand at 590.732 kb on - strand, within GFF549 at 590.957 kb on - strand, within GFF549 at 591.229 kb on + strand, within GFF549 at 591.251 kb on - strand, within GFF549
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 589,235 - GFF547 0.59 +0.1 589,357 + GFF547 0.65 -1.1 589,357 + GFF547 0.65 -0.7 589,358 - GFF547 0.65 -0.1 589,358 - GFF547 0.65 -1.9 589,358 - GFF547 0.65 -1.2 589,358 - GFF547 0.65 -0.8 589,455 + GFF547 0.70 -1.2 589,483 + GFF547 0.71 -0.4 589,483 + GFF547 0.71 -0.6 589,483 + GFF547 0.71 -1.0 589,484 - GFF547 0.72 -1.3 589,484 - GFF547 0.72 -0.2 589,719 + GFF547 0.84 -0.8 589,891 + -0.9 589,891 + -0.5 589,892 - -1.6 589,892 - -0.4 590,120 + GFF548 0.13 +0.6 590,120 + GFF548 0.13 +0.1 590,307 - GFF548 0.55 -0.2 590,307 - GFF548 0.55 -1.5 590,424 - GFF548 0.82 +0.5 590,424 - GFF548 0.82 -0.4 590,424 - GFF548 0.82 +2.0 590,494 - +0.2 590,732 - GFF549 0.12 -1.1 590,957 - GFF549 0.30 +0.2 591,229 + GFF549 0.51 +0.4 591,251 - GFF549 0.53 -0.0
Or see this region's nucleotide sequence