Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF545 and GFF546 are separated by 149 nucleotides GFF546 and GFF547 are separated by 6 nucleotides
GFF545 - hypothetical protein, at 586,943 to 587,551
GFF545
GFF546 - hypothetical protein, at 587,701 to 588,078
GFF546
GFF547 - ATM1-type heavy metal exporter, at 588,085 to 590,040
GFF547
Position (kb) 587
588
589 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 586.713 kb on - strand at 586.713 kb on - strand at 586.717 kb on - strand at 586.786 kb on + strand at 586.944 kb on + strand at 586.944 kb on + strand at 586.945 kb on - strand at 586.945 kb on - strand at 586.945 kb on - strand at 587.354 kb on - strand, within GFF545 at 587.524 kb on - strand at 587.606 kb on - strand at 587.965 kb on + strand, within GFF546 at 587.966 kb on - strand, within GFF546 at 587.966 kb on - strand, within GFF546 at 588.076 kb on + strand at 588.169 kb on + strand at 588.676 kb on + strand, within GFF547 at 588.676 kb on + strand, within GFF547 at 588.677 kb on - strand, within GFF547 at 588.725 kb on - strand, within GFF547 at 588.832 kb on + strand, within GFF547 at 588.832 kb on + strand, within GFF547 at 588.833 kb on - strand, within GFF547 at 588.833 kb on - strand, within GFF547 at 588.887 kb on - strand, within GFF547 at 588.911 kb on - strand, within GFF547 at 588.911 kb on - strand, within GFF547 at 588.911 kb on - strand, within GFF547 at 588.911 kb on - strand, within GFF547 at 588.911 kb on - strand, within GFF547
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 586,713 - +1.2 586,713 - +0.9 586,717 - -0.1 586,786 + +0.5 586,944 + +0.0 586,944 + -0.2 586,945 - +0.1 586,945 - -1.1 586,945 - -0.1 587,354 - GFF545 0.67 +0.1 587,524 - +0.8 587,606 - -0.8 587,965 + GFF546 0.70 -1.7 587,966 - GFF546 0.70 -0.2 587,966 - GFF546 0.70 -0.8 588,076 + +0.9 588,169 + +0.6 588,676 + GFF547 0.30 -3.4 588,676 + GFF547 0.30 -0.7 588,677 - GFF547 0.30 +0.6 588,725 - GFF547 0.33 -0.9 588,832 + GFF547 0.38 -0.8 588,832 + GFF547 0.38 -1.3 588,833 - GFF547 0.38 -1.2 588,833 - GFF547 0.38 -1.4 588,887 - GFF547 0.41 -0.7 588,911 - GFF547 0.42 -0.5 588,911 - GFF547 0.42 -1.5 588,911 - GFF547 0.42 -0.3 588,911 - GFF547 0.42 -0.9 588,911 - GFF547 0.42 -0.1
Or see this region's nucleotide sequence