Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4748 and GFF4749 are separated by 19 nucleotides GFF4749 and GFF4750 are separated by 5 nucleotides GFF4750 and GFF4751 overlap by 1 nucleotides GFF4751 and GFF4752 are separated by 180 nucleotides GFF4752 and GFF4753 are separated by 17 nucleotides
GFF4748 - Enolase-phosphatase E1, at 163,528 to 164,205
GFF4748
GFF4749 - Chloroacetanilide N-alkylformylase 2, ferredoxin component, at 164,225 to 164,554
GFF4749
GFF4750 - hypothetical protein, at 164,560 to 165,045
GFF4750
GFF4751 - hypothetical protein, at 165,045 to 166,334
GFF4751
GFF4752 - hypothetical protein, at 166,515 to 166,850
GFF4752
GFF4753 - hypothetical protein, at 166,868 to 167,332
GFF4753
Position (kb) 165
166
167 Strain fitness (log2 ratio) -2
-1
0
1 at 164.523 kb on + strand at 164.524 kb on - strand at 164.675 kb on + strand, within GFF4750 at 164.676 kb on - strand, within GFF4750 at 164.676 kb on - strand, within GFF4750 at 164.676 kb on - strand, within GFF4750 at 164.780 kb on + strand, within GFF4750 at 164.781 kb on - strand, within GFF4750 at 164.781 kb on - strand, within GFF4750 at 165.038 kb on + strand at 165.166 kb on + strand at 165.166 kb on + strand at 165.407 kb on - strand, within GFF4751 at 165.407 kb on - strand, within GFF4751 at 165.601 kb on + strand, within GFF4751 at 165.601 kb on + strand, within GFF4751 at 165.602 kb on - strand, within GFF4751 at 165.602 kb on - strand, within GFF4751 at 166.495 kb on + strand at 166.655 kb on - strand, within GFF4752 at 166.738 kb on + strand, within GFF4752 at 166.813 kb on + strand, within GFF4752 at 166.813 kb on + strand, within GFF4752 at 166.813 kb on + strand, within GFF4752 at 166.814 kb on - strand, within GFF4752 at 166.814 kb on - strand, within GFF4752
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 164,523 + -0.2 164,524 - -0.1 164,675 + GFF4750 0.24 +0.0 164,676 - GFF4750 0.24 -0.2 164,676 - GFF4750 0.24 +0.7 164,676 - GFF4750 0.24 +1.5 164,780 + GFF4750 0.45 -1.1 164,781 - GFF4750 0.45 +0.3 164,781 - GFF4750 0.45 -0.9 165,038 + +0.7 165,166 + -2.3 165,166 + -0.3 165,407 - GFF4751 0.28 +0.4 165,407 - GFF4751 0.28 +1.6 165,601 + GFF4751 0.43 -0.8 165,601 + GFF4751 0.43 -0.2 165,602 - GFF4751 0.43 -0.3 165,602 - GFF4751 0.43 +1.2 166,495 + +1.1 166,655 - GFF4752 0.42 -0.2 166,738 + GFF4752 0.66 -1.0 166,813 + GFF4752 0.89 -0.4 166,813 + GFF4752 0.89 -0.3 166,813 + GFF4752 0.89 +0.5 166,814 - GFF4752 0.89 +0.3 166,814 - GFF4752 0.89 +0.4
Or see this region's nucleotide sequence