Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4730 and GFF4731 are separated by 129 nucleotides GFF4731 and GFF4732 are separated by 33 nucleotides
GFF4730 - hypothetical protein, at 141,151 to 142,128
GFF4730
GFF4731 - hypothetical protein, at 142,258 to 143,436
GFF4731
GFF4732 - GTP 3',8-cyclase, at 143,470 to 144,501
GFF4732
Position (kb) 142
143
144 Strain fitness (log2 ratio) -2
-1
0
1 at 141.287 kb on + strand, within GFF4730 at 141.287 kb on + strand, within GFF4730 at 141.287 kb on + strand, within GFF4730 at 141.288 kb on - strand, within GFF4730 at 141.308 kb on + strand, within GFF4730 at 141.308 kb on + strand, within GFF4730 at 141.309 kb on - strand, within GFF4730 at 141.309 kb on - strand, within GFF4730 at 141.309 kb on - strand, within GFF4730 at 141.392 kb on + strand, within GFF4730 at 141.392 kb on + strand, within GFF4730 at 141.393 kb on - strand, within GFF4730 at 141.588 kb on - strand, within GFF4730 at 141.588 kb on - strand, within GFF4730 at 141.588 kb on - strand, within GFF4730 at 141.588 kb on - strand, within GFF4730 at 141.611 kb on + strand, within GFF4730 at 141.611 kb on + strand, within GFF4730 at 141.612 kb on - strand, within GFF4730 at 141.612 kb on - strand, within GFF4730 at 141.612 kb on - strand, within GFF4730 at 141.612 kb on - strand, within GFF4730 at 141.653 kb on + strand, within GFF4730 at 141.749 kb on + strand, within GFF4730 at 141.758 kb on + strand, within GFF4730 at 141.759 kb on - strand, within GFF4730 at 141.986 kb on + strand, within GFF4730 at 142.181 kb on + strand at 142.181 kb on + strand at 142.181 kb on + strand at 142.220 kb on + strand at 142.220 kb on + strand at 142.287 kb on - strand at 142.992 kb on + strand, within GFF4731 at 142.993 kb on - strand, within GFF4731 at 143.846 kb on + strand, within GFF4732 at 143.847 kb on - strand, within GFF4732 at 144.422 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 141,287 + GFF4730 0.14 +0.1 141,287 + GFF4730 0.14 +0.4 141,287 + GFF4730 0.14 -1.4 141,288 - GFF4730 0.14 -0.9 141,308 + GFF4730 0.16 -2.1 141,308 + GFF4730 0.16 -1.2 141,309 - GFF4730 0.16 -1.5 141,309 - GFF4730 0.16 +0.5 141,309 - GFF4730 0.16 +0.4 141,392 + GFF4730 0.25 +1.3 141,392 + GFF4730 0.25 -0.9 141,393 - GFF4730 0.25 -0.0 141,588 - GFF4730 0.45 -0.4 141,588 - GFF4730 0.45 -0.2 141,588 - GFF4730 0.45 +0.0 141,588 - GFF4730 0.45 +0.6 141,611 + GFF4730 0.47 +0.2 141,611 + GFF4730 0.47 -1.0 141,612 - GFF4730 0.47 -1.1 141,612 - GFF4730 0.47 -0.3 141,612 - GFF4730 0.47 +0.8 141,612 - GFF4730 0.47 -1.0 141,653 + GFF4730 0.51 -0.3 141,749 + GFF4730 0.61 -0.2 141,758 + GFF4730 0.62 +0.2 141,759 - GFF4730 0.62 -0.3 141,986 + GFF4730 0.85 +0.0 142,181 + -0.3 142,181 + -0.8 142,181 + -0.3 142,220 + +0.5 142,220 + -0.1 142,287 - +0.9 142,992 + GFF4731 0.62 -0.4 142,993 - GFF4731 0.62 -0.9 143,846 + GFF4732 0.36 -0.4 143,847 - GFF4732 0.37 -0.2 144,422 + -0.9
Or see this region's nucleotide sequence