Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4521 and GFF4522 are separated by 319 nucleotides GFF4522 and GFF4523 are separated by 120 nucleotides
GFF4521 - Chemotaxis protein methyltransferase 1, at 94,911 to 95,756
GFF4521
GFF4522 - Flagellar transcriptional regulator FtcR, at 96,076 to 96,747
GFF4522
GFF4523 - hypothetical protein, at 96,868 to 98,544
GFF4523
Position (kb) 96
97 Strain fitness (log2 ratio) -2
-1
0
1 at 95.262 kb on + strand, within GFF4521 at 95.263 kb on - strand, within GFF4521 at 95.376 kb on + strand, within GFF4521 at 95.376 kb on + strand, within GFF4521 at 95.376 kb on + strand, within GFF4521 at 95.377 kb on - strand, within GFF4521 at 95.377 kb on - strand, within GFF4521 at 95.377 kb on - strand, within GFF4521 at 95.428 kb on - strand, within GFF4521 at 95.428 kb on - strand, within GFF4521 at 95.428 kb on - strand, within GFF4521 at 95.487 kb on + strand, within GFF4521 at 95.528 kb on + strand, within GFF4521 at 95.529 kb on - strand, within GFF4521 at 95.529 kb on - strand, within GFF4521 at 95.565 kb on + strand, within GFF4521 at 95.566 kb on - strand, within GFF4521 at 95.709 kb on + strand at 95.709 kb on + strand at 95.709 kb on + strand at 95.710 kb on - strand at 95.896 kb on + strand at 95.897 kb on - strand at 95.897 kb on - strand at 96.016 kb on + strand at 96.072 kb on + strand at 96.079 kb on + strand at 96.079 kb on + strand at 96.262 kb on + strand, within GFF4522 at 96.262 kb on + strand, within GFF4522 at 96.263 kb on - strand, within GFF4522 at 96.263 kb on - strand, within GFF4522 at 96.263 kb on - strand, within GFF4522 at 96.483 kb on - strand, within GFF4522 at 96.553 kb on + strand, within GFF4522 at 96.553 kb on + strand, within GFF4522 at 96.554 kb on - strand, within GFF4522 at 96.555 kb on + strand, within GFF4522 at 96.610 kb on + strand, within GFF4522 at 96.610 kb on + strand, within GFF4522 at 96.610 kb on + strand, within GFF4522 at 96.611 kb on - strand, within GFF4522 at 96.611 kb on - strand, within GFF4522 at 96.611 kb on - strand, within GFF4522 at 96.611 kb on - strand, within GFF4522 at 96.722 kb on - strand at 96.731 kb on - strand at 96.736 kb on + strand at 96.737 kb on - strand at 96.737 kb on - strand at 96.737 kb on - strand at 97.037 kb on - strand, within GFF4523 at 97.039 kb on - strand, within GFF4523 at 97.039 kb on - strand, within GFF4523 at 97.039 kb on - strand, within GFF4523 at 97.039 kb on - strand, within GFF4523 at 97.076 kb on + strand, within GFF4523 at 97.162 kb on + strand, within GFF4523 at 97.163 kb on - strand, within GFF4523 at 97.208 kb on - strand, within GFF4523 at 97.260 kb on + strand, within GFF4523 at 97.261 kb on - strand, within GFF4523 at 97.372 kb on + strand, within GFF4523 at 97.372 kb on + strand, within GFF4523 at 97.373 kb on - strand, within GFF4523
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 95,262 + GFF4521 0.41 +0.6 95,263 - GFF4521 0.42 -0.6 95,376 + GFF4521 0.55 +0.5 95,376 + GFF4521 0.55 +0.3 95,376 + GFF4521 0.55 +1.4 95,377 - GFF4521 0.55 -0.2 95,377 - GFF4521 0.55 -0.2 95,377 - GFF4521 0.55 -0.1 95,428 - GFF4521 0.61 -0.8 95,428 - GFF4521 0.61 +1.3 95,428 - GFF4521 0.61 -0.5 95,487 + GFF4521 0.68 +0.4 95,528 + GFF4521 0.73 +1.3 95,529 - GFF4521 0.73 -1.2 95,529 - GFF4521 0.73 -0.9 95,565 + GFF4521 0.77 -0.4 95,566 - GFF4521 0.77 +0.4 95,709 + -0.5 95,709 + +1.0 95,709 + +0.4 95,710 - +1.3 95,896 + -0.3 95,897 - -1.3 95,897 - -0.8 96,016 + -1.3 96,072 + -0.5 96,079 + -0.8 96,079 + -1.4 96,262 + GFF4522 0.28 -0.4 96,262 + GFF4522 0.28 -0.9 96,263 - GFF4522 0.28 -2.2 96,263 - GFF4522 0.28 -0.5 96,263 - GFF4522 0.28 -1.5 96,483 - GFF4522 0.61 -0.5 96,553 + GFF4522 0.71 -0.1 96,553 + GFF4522 0.71 -1.6 96,554 - GFF4522 0.71 -1.8 96,555 + GFF4522 0.71 -1.8 96,610 + GFF4522 0.79 -0.9 96,610 + GFF4522 0.79 +0.7 96,610 + GFF4522 0.79 -1.4 96,611 - GFF4522 0.80 -0.1 96,611 - GFF4522 0.80 -1.6 96,611 - GFF4522 0.80 +1.3 96,611 - GFF4522 0.80 -1.3 96,722 - -1.6 96,731 - -2.2 96,736 + -2.1 96,737 - -1.2 96,737 - -1.1 96,737 - -1.2 97,037 - GFF4523 0.10 -1.7 97,039 - GFF4523 0.10 +0.2 97,039 - GFF4523 0.10 -0.2 97,039 - GFF4523 0.10 -0.6 97,039 - GFF4523 0.10 +0.2 97,076 + GFF4523 0.12 -0.4 97,162 + GFF4523 0.18 -0.6 97,163 - GFF4523 0.18 +1.3 97,208 - GFF4523 0.20 +0.9 97,260 + GFF4523 0.23 +0.1 97,261 - GFF4523 0.23 -1.0 97,372 + GFF4523 0.30 +0.2 97,372 + GFF4523 0.30 +0.4 97,373 - GFF4523 0.30 +0.4
Or see this region's nucleotide sequence