Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4476 and GFF4477 are separated by 163 nucleotides GFF4477 and GFF4478 overlap by 53 nucleotides
GFF4476 - hypothetical protein, at 54,456 to 55,154
GFF4476
GFF4477 - hypothetical protein, at 55,318 to 56,157
GFF4477
GFF4478 - hypothetical protein, at 56,105 to 57,544
GFF4478
Position (kb) 55
56
57 Strain fitness (log2 ratio) -2
-1
0
1 at 54.454 kb on + strand at 54.455 kb on - strand at 55.323 kb on - strand at 55.451 kb on + strand, within GFF4477 at 55.452 kb on - strand, within GFF4477 at 55.452 kb on - strand, within GFF4477 at 55.452 kb on - strand, within GFF4477 at 55.452 kb on - strand, within GFF4477 at 55.452 kb on - strand, within GFF4477 at 55.452 kb on - strand, within GFF4477 at 55.540 kb on + strand, within GFF4477 at 55.540 kb on + strand, within GFF4477 at 55.541 kb on - strand, within GFF4477 at 55.541 kb on - strand, within GFF4477 at 55.541 kb on - strand, within GFF4477 at 55.620 kb on - strand, within GFF4477 at 55.716 kb on + strand, within GFF4477 at 55.716 kb on + strand, within GFF4477 at 55.716 kb on + strand, within GFF4477 at 55.717 kb on - strand, within GFF4477 at 55.734 kb on + strand, within GFF4477 at 55.735 kb on - strand, within GFF4477 at 55.794 kb on - strand, within GFF4477 at 55.794 kb on - strand, within GFF4477 at 55.817 kb on + strand, within GFF4477 at 55.817 kb on + strand, within GFF4477 at 55.817 kb on + strand, within GFF4477 at 55.818 kb on - strand, within GFF4477 at 56.185 kb on + strand at 56.185 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 54,454 + +0.4 54,455 - +0.7 55,323 - +0.7 55,451 + GFF4477 0.16 +0.2 55,452 - GFF4477 0.16 +0.3 55,452 - GFF4477 0.16 -1.8 55,452 - GFF4477 0.16 -0.8 55,452 - GFF4477 0.16 -1.9 55,452 - GFF4477 0.16 +0.9 55,452 - GFF4477 0.16 -0.9 55,540 + GFF4477 0.26 +0.7 55,540 + GFF4477 0.26 -2.0 55,541 - GFF4477 0.27 -0.4 55,541 - GFF4477 0.27 -0.4 55,541 - GFF4477 0.27 -0.7 55,620 - GFF4477 0.36 -2.0 55,716 + GFF4477 0.47 -0.5 55,716 + GFF4477 0.47 +0.5 55,716 + GFF4477 0.47 -2.3 55,717 - GFF4477 0.47 -0.7 55,734 + GFF4477 0.50 -0.8 55,735 - GFF4477 0.50 -1.1 55,794 - GFF4477 0.57 -0.9 55,794 - GFF4477 0.57 -0.8 55,817 + GFF4477 0.59 -1.5 55,817 + GFF4477 0.59 -1.4 55,817 + GFF4477 0.59 -1.6 55,818 - GFF4477 0.60 -1.0 56,185 + -0.9 56,185 + -0.9
Or see this region's nucleotide sequence