Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4386 and GFF4387 overlap by 14 nucleotides GFF4387 and GFF4388 are separated by 17 nucleotides GFF4388 and GFF4389 are separated by 35 nucleotides
GFF4386 - hypothetical protein, at 185,358 to 187,115
GFF4386
GFF4387 - Steroid C26-monooxygenase, at 187,102 to 188,370
GFF4387
GFF4388 - hypothetical protein, at 188,388 to 189,095
GFF4388
GFF4389 - hypothetical protein, at 189,131 to 190,186
GFF4389
Position (kb) 187
188
189 Strain fitness (log2 ratio) -1
0
1
2 at 186.105 kb on + strand, within GFF4386 at 186.132 kb on + strand, within GFF4386 at 186.133 kb on - strand, within GFF4386 at 186.133 kb on - strand, within GFF4386 at 186.133 kb on - strand, within GFF4386 at 186.165 kb on + strand, within GFF4386 at 186.166 kb on - strand, within GFF4386 at 186.715 kb on - strand, within GFF4386 at 186.715 kb on - strand, within GFF4386 at 186.777 kb on + strand, within GFF4386 at 186.849 kb on + strand, within GFF4386 at 186.849 kb on + strand, within GFF4386 at 186.849 kb on + strand, within GFF4386 at 186.850 kb on - strand, within GFF4386 at 186.850 kb on - strand, within GFF4386 at 186.850 kb on - strand, within GFF4386 at 186.891 kb on + strand, within GFF4386 at 186.891 kb on + strand, within GFF4386 at 186.891 kb on + strand, within GFF4386 at 186.892 kb on - strand, within GFF4386 at 186.892 kb on - strand, within GFF4386 at 187.077 kb on + strand at 187.262 kb on - strand, within GFF4387 at 187.348 kb on + strand, within GFF4387 at 187.348 kb on + strand, within GFF4387 at 187.348 kb on + strand, within GFF4387 at 187.348 kb on + strand, within GFF4387 at 187.349 kb on - strand, within GFF4387 at 187.402 kb on + strand, within GFF4387 at 187.403 kb on - strand, within GFF4387 at 187.612 kb on + strand, within GFF4387 at 187.612 kb on + strand, within GFF4387 at 187.612 kb on + strand, within GFF4387 at 187.613 kb on - strand, within GFF4387 at 187.613 kb on - strand, within GFF4387 at 187.993 kb on + strand, within GFF4387 at 187.994 kb on - strand, within GFF4387 at 187.994 kb on - strand, within GFF4387 at 188.059 kb on + strand, within GFF4387 at 188.059 kb on + strand, within GFF4387 at 188.123 kb on + strand, within GFF4387 at 188.124 kb on - strand, within GFF4387 at 188.124 kb on - strand, within GFF4387 at 188.200 kb on + strand, within GFF4387 at 188.200 kb on + strand, within GFF4387 at 188.200 kb on + strand, within GFF4387 at 188.351 kb on - strand at 188.377 kb on - strand at 188.514 kb on + strand, within GFF4388 at 188.571 kb on + strand, within GFF4388 at 188.572 kb on - strand, within GFF4388 at 188.760 kb on + strand, within GFF4388 at 188.760 kb on + strand, within GFF4388 at 188.760 kb on + strand, within GFF4388 at 188.761 kb on - strand, within GFF4388 at 188.761 kb on - strand, within GFF4388 at 188.761 kb on - strand, within GFF4388 at 188.880 kb on + strand, within GFF4388 at 189.093 kb on + strand at 189.093 kb on + strand at 189.094 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 186,105 + GFF4386 0.42 -1.3 186,132 + GFF4386 0.44 -0.1 186,133 - GFF4386 0.44 -0.4 186,133 - GFF4386 0.44 +1.1 186,133 - GFF4386 0.44 +0.1 186,165 + GFF4386 0.46 -0.7 186,166 - GFF4386 0.46 +1.1 186,715 - GFF4386 0.77 -1.6 186,715 - GFF4386 0.77 -1.2 186,777 + GFF4386 0.81 -0.4 186,849 + GFF4386 0.85 -0.7 186,849 + GFF4386 0.85 -0.2 186,849 + GFF4386 0.85 -0.2 186,850 - GFF4386 0.85 -0.2 186,850 - GFF4386 0.85 -1.2 186,850 - GFF4386 0.85 +0.2 186,891 + GFF4386 0.87 +0.0 186,891 + GFF4386 0.87 -0.7 186,891 + GFF4386 0.87 +0.7 186,892 - GFF4386 0.87 -0.6 186,892 - GFF4386 0.87 +0.7 187,077 + +0.5 187,262 - GFF4387 0.13 -0.2 187,348 + GFF4387 0.19 -1.1 187,348 + GFF4387 0.19 -0.4 187,348 + GFF4387 0.19 -0.5 187,348 + GFF4387 0.19 +0.3 187,349 - GFF4387 0.19 +0.3 187,402 + GFF4387 0.24 -0.1 187,403 - GFF4387 0.24 +0.4 187,612 + GFF4387 0.40 +0.9 187,612 + GFF4387 0.40 +1.5 187,612 + GFF4387 0.40 -1.7 187,613 - GFF4387 0.40 -0.6 187,613 - GFF4387 0.40 +0.6 187,993 + GFF4387 0.70 +1.8 187,994 - GFF4387 0.70 +0.1 187,994 - GFF4387 0.70 +0.3 188,059 + GFF4387 0.75 -0.2 188,059 + GFF4387 0.75 +0.0 188,123 + GFF4387 0.80 -0.2 188,124 - GFF4387 0.81 -0.4 188,124 - GFF4387 0.81 -0.6 188,200 + GFF4387 0.87 -0.2 188,200 + GFF4387 0.87 -0.5 188,200 + GFF4387 0.87 -1.4 188,351 - -1.0 188,377 - +0.6 188,514 + GFF4388 0.18 -0.9 188,571 + GFF4388 0.26 -0.6 188,572 - GFF4388 0.26 +2.3 188,760 + GFF4388 0.53 -0.7 188,760 + GFF4388 0.53 -0.5 188,760 + GFF4388 0.53 -0.5 188,761 - GFF4388 0.53 -0.4 188,761 - GFF4388 0.53 +0.5 188,761 - GFF4388 0.53 +0.3 188,880 + GFF4388 0.69 -0.9 189,093 + -0.7 189,093 + +0.5 189,094 - +0.5
Or see this region's nucleotide sequence