Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4384 and GFF4385 are separated by 327 nucleotides GFF4385 and GFF4386 are separated by 124 nucleotides
GFF4384 - hypothetical protein, at 182,291 to 183,769
GFF4384
GFF4385 - hypothetical protein, at 184,097 to 185,233
GFF4385
GFF4386 - hypothetical protein, at 185,358 to 187,115
GFF4386
Position (kb) 184
185
186 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 183.336 kb on + strand, within GFF4384 at 183.337 kb on - strand, within GFF4384 at 183.492 kb on + strand, within GFF4384 at 183.492 kb on + strand, within GFF4384 at 183.839 kb on + strand at 183.986 kb on + strand at 183.987 kb on - strand at 184.071 kb on - strand at 184.115 kb on + strand at 184.116 kb on - strand at 184.116 kb on - strand at 184.116 kb on - strand at 184.116 kb on - strand at 184.139 kb on + strand at 184.289 kb on + strand, within GFF4385 at 184.289 kb on + strand, within GFF4385 at 184.290 kb on - strand, within GFF4385 at 184.305 kb on - strand, within GFF4385 at 184.337 kb on + strand, within GFF4385 at 184.337 kb on + strand, within GFF4385 at 184.337 kb on + strand, within GFF4385 at 184.338 kb on - strand, within GFF4385 at 184.338 kb on - strand, within GFF4385 at 184.338 kb on - strand, within GFF4385 at 184.338 kb on - strand, within GFF4385 at 184.495 kb on + strand, within GFF4385 at 184.495 kb on + strand, within GFF4385 at 184.496 kb on - strand, within GFF4385 at 184.496 kb on - strand, within GFF4385 at 184.595 kb on + strand, within GFF4385 at 185.156 kb on + strand at 185.284 kb on - strand at 185.381 kb on + strand at 185.545 kb on - strand, within GFF4386 at 185.847 kb on + strand, within GFF4386 at 186.105 kb on + strand, within GFF4386 at 186.132 kb on + strand, within GFF4386 at 186.133 kb on - strand, within GFF4386 at 186.133 kb on - strand, within GFF4386 at 186.133 kb on - strand, within GFF4386 at 186.165 kb on + strand, within GFF4386 at 186.166 kb on - strand, within GFF4386
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 183,336 + GFF4384 0.71 -2.7 183,337 - GFF4384 0.71 -3.1 183,492 + GFF4384 0.81 -1.4 183,492 + GFF4384 0.81 -1.9 183,839 + -2.2 183,986 + +0.1 183,987 - +0.4 184,071 - -1.7 184,115 + -1.5 184,116 - -1.8 184,116 - -1.2 184,116 - -0.6 184,116 - -0.6 184,139 + +0.1 184,289 + GFF4385 0.17 -1.4 184,289 + GFF4385 0.17 +0.1 184,290 - GFF4385 0.17 -1.8 184,305 - GFF4385 0.18 +0.8 184,337 + GFF4385 0.21 +0.4 184,337 + GFF4385 0.21 -1.8 184,337 + GFF4385 0.21 -1.9 184,338 - GFF4385 0.21 -1.3 184,338 - GFF4385 0.21 -0.9 184,338 - GFF4385 0.21 -3.1 184,338 - GFF4385 0.21 -1.3 184,495 + GFF4385 0.35 -2.6 184,495 + GFF4385 0.35 +0.2 184,496 - GFF4385 0.35 -0.7 184,496 - GFF4385 0.35 -0.5 184,595 + GFF4385 0.44 -1.5 185,156 + -0.1 185,284 - -0.6 185,381 + -0.9 185,545 - GFF4386 0.11 -0.9 185,847 + GFF4386 0.28 -0.0 186,105 + GFF4386 0.42 -1.3 186,132 + GFF4386 0.44 -0.1 186,133 - GFF4386 0.44 -0.4 186,133 - GFF4386 0.44 +1.1 186,133 - GFF4386 0.44 +0.1 186,165 + GFF4386 0.46 -0.7 186,166 - GFF4386 0.46 +1.1
Or see this region's nucleotide sequence