Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF434 and GFF435 overlap by 4 nucleotides GFF435 and GFF436 overlap by 4 nucleotides
GFF434 - Phytoene desaturase (lycopene-forming), at 457,139 to 458,656
GFF434
GFF435 - 15-cis-phytoene synthase, at 458,653 to 459,594
GFF435
GFF436 - Zeaxanthin glucosyltransferase, at 459,591 to 460,856
GFF436
Position (kb) 458
459
460 Strain fitness (log2 ratio) -1
0
1
2 at 457.658 kb on + strand, within GFF434 at 457.680 kb on + strand, within GFF434 at 457.681 kb on - strand, within GFF434 at 457.760 kb on + strand, within GFF434 at 457.761 kb on - strand, within GFF434 at 457.761 kb on - strand, within GFF434 at 457.994 kb on + strand, within GFF434 at 457.994 kb on + strand, within GFF434 at 457.994 kb on + strand, within GFF434 at 457.994 kb on + strand, within GFF434 at 457.995 kb on - strand, within GFF434 at 457.995 kb on - strand, within GFF434 at 458.084 kb on + strand, within GFF434 at 458.207 kb on + strand, within GFF434 at 458.208 kb on - strand, within GFF434 at 458.208 kb on - strand, within GFF434 at 458.208 kb on - strand, within GFF434 at 458.267 kb on + strand, within GFF434 at 458.267 kb on + strand, within GFF434 at 458.268 kb on - strand, within GFF434 at 458.782 kb on + strand, within GFF435 at 458.782 kb on + strand, within GFF435 at 458.783 kb on - strand, within GFF435 at 459.034 kb on + strand, within GFF435 at 459.062 kb on - strand, within GFF435 at 459.067 kb on + strand, within GFF435 at 459.068 kb on - strand, within GFF435 at 459.068 kb on - strand, within GFF435 at 459.068 kb on - strand, within GFF435 at 459.220 kb on + strand, within GFF435 at 459.220 kb on + strand, within GFF435 at 459.220 kb on + strand, within GFF435 at 459.220 kb on + strand, within GFF435 at 459.221 kb on - strand, within GFF435 at 459.221 kb on - strand, within GFF435 at 459.221 kb on - strand, within GFF435 at 459.221 kb on - strand, within GFF435 at 459.254 kb on + strand, within GFF435 at 459.338 kb on - strand, within GFF435 at 459.633 kb on + strand at 459.633 kb on + strand at 459.634 kb on - strand at 459.634 kb on - strand at 459.634 kb on - strand at 459.789 kb on + strand, within GFF436 at 459.789 kb on + strand, within GFF436 at 459.789 kb on + strand, within GFF436 at 459.790 kb on - strand, within GFF436 at 459.790 kb on - strand, within GFF436 at 460.050 kb on + strand, within GFF436 at 460.264 kb on - strand, within GFF436
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 457,658 + GFF434 0.34 +0.3 457,680 + GFF434 0.36 -0.3 457,681 - GFF434 0.36 +1.7 457,760 + GFF434 0.41 +0.2 457,761 - GFF434 0.41 -0.3 457,761 - GFF434 0.41 -1.2 457,994 + GFF434 0.56 -0.9 457,994 + GFF434 0.56 +0.2 457,994 + GFF434 0.56 -0.3 457,994 + GFF434 0.56 +0.5 457,995 - GFF434 0.56 -0.5 457,995 - GFF434 0.56 +0.0 458,084 + GFF434 0.62 -0.4 458,207 + GFF434 0.70 +0.7 458,208 - GFF434 0.70 +0.1 458,208 - GFF434 0.70 +0.5 458,208 - GFF434 0.70 +0.7 458,267 + GFF434 0.74 -1.0 458,267 + GFF434 0.74 -0.3 458,268 - GFF434 0.74 -0.0 458,782 + GFF435 0.14 -0.8 458,782 + GFF435 0.14 +0.3 458,783 - GFF435 0.14 -1.6 459,034 + GFF435 0.40 -0.3 459,062 - GFF435 0.43 +0.6 459,067 + GFF435 0.44 +1.0 459,068 - GFF435 0.44 -0.0 459,068 - GFF435 0.44 -0.5 459,068 - GFF435 0.44 -0.7 459,220 + GFF435 0.60 -1.5 459,220 + GFF435 0.60 -0.2 459,220 + GFF435 0.60 +0.9 459,220 + GFF435 0.60 +1.0 459,221 - GFF435 0.60 -0.0 459,221 - GFF435 0.60 +1.0 459,221 - GFF435 0.60 +0.7 459,221 - GFF435 0.60 -0.2 459,254 + GFF435 0.64 -0.0 459,338 - GFF435 0.73 -0.1 459,633 + +0.8 459,633 + +1.7 459,634 - -0.1 459,634 - +0.9 459,634 - -0.2 459,789 + GFF436 0.16 +0.0 459,789 + GFF436 0.16 +0.0 459,789 + GFF436 0.16 -0.0 459,790 - GFF436 0.16 -0.8 459,790 - GFF436 0.16 +1.8 460,050 + GFF436 0.36 -0.5 460,264 - GFF436 0.53 +0.3
Or see this region's nucleotide sequence