Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4281 and GFF4282 are separated by 283 nucleotides GFF4282 and GFF4283 are separated by 291 nucleotides
GFF4281 - Adenosine deaminase, at 52,932 to 54,479
GFF4281
GFF4282 - hypothetical protein, at 54,763 to 55,413
GFF4282
GFF4283 - hypothetical protein, at 55,705 to 63,177
GFF4283
Position (kb) 54
55
56 Strain fitness (log2 ratio) -1
0
1 at 53.905 kb on + strand, within GFF4281 at 53.905 kb on + strand, within GFF4281 at 54.275 kb on - strand, within GFF4281 at 54.520 kb on + strand at 54.944 kb on + strand, within GFF4282 at 55.469 kb on + strand at 55.469 kb on + strand at 55.470 kb on - strand at 55.660 kb on + strand at 55.748 kb on + strand at 55.748 kb on + strand at 55.749 kb on - strand at 55.919 kb on + strand at 55.919 kb on + strand at 55.920 kb on - strand at 55.955 kb on + strand at 55.955 kb on + strand at 55.971 kb on - strand at 56.081 kb on + strand at 56.081 kb on + strand at 56.082 kb on - strand at 56.192 kb on + strand at 56.223 kb on - strand at 56.223 kb on - strand at 56.223 kb on - strand at 56.223 kb on - strand at 56.223 kb on - strand at 56.223 kb on - strand at 56.265 kb on - strand at 56.265 kb on - strand at 56.282 kb on + strand at 56.282 kb on + strand at 56.282 kb on + strand at 56.282 kb on + strand at 56.282 kb on + strand at 56.283 kb on - strand at 56.283 kb on - strand at 56.283 kb on - strand at 56.283 kb on - strand at 56.283 kb on - strand at 56.283 kb on - strand at 56.283 kb on - strand at 56.283 kb on - strand at 56.291 kb on + strand at 56.291 kb on + strand at 56.292 kb on - strand at 56.292 kb on - strand at 56.292 kb on - strand at 56.343 kb on - strand at 56.363 kb on + strand at 56.364 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 53,905 + GFF4281 0.63 +0.4 53,905 + GFF4281 0.63 -0.7 54,275 - GFF4281 0.87 -0.2 54,520 + +0.5 54,944 + GFF4282 0.28 +0.1 55,469 + -0.1 55,469 + +1.0 55,470 - +0.4 55,660 + +0.8 55,748 + -0.7 55,748 + -0.5 55,749 - -0.1 55,919 + +0.5 55,919 + -0.4 55,920 - +0.3 55,955 + -0.3 55,955 + +1.0 55,971 - -1.3 56,081 + +0.1 56,081 + -0.5 56,082 - -0.5 56,192 + -0.4 56,223 - -0.1 56,223 - +0.2 56,223 - -0.6 56,223 - +0.0 56,223 - +0.5 56,223 - -0.4 56,265 - +0.8 56,265 - -0.4 56,282 + -0.6 56,282 + +0.4 56,282 + +0.6 56,282 + +0.5 56,282 + -1.3 56,283 - +1.3 56,283 - +0.3 56,283 - -1.6 56,283 - +0.3 56,283 - -0.2 56,283 - +0.4 56,283 - +0.2 56,283 - +0.7 56,291 + -0.9 56,291 + -0.5 56,292 - +0.9 56,292 - +0.8 56,292 - -0.2 56,343 - -0.4 56,363 + -0.1 56,364 - +0.6
Or see this region's nucleotide sequence