Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4279 and GFF4280 are separated by 55 nucleotides GFF4280 and GFF4281 are separated by 10 nucleotides GFF4281 and GFF4282 are separated by 283 nucleotides
GFF4279 - hypothetical protein, at 50,989 to 52,080
GFF4279
GFF4280 - hypothetical protein, at 52,136 to 52,921
GFF4280
GFF4281 - Adenosine deaminase, at 52,932 to 54,479
GFF4281
GFF4282 - hypothetical protein, at 54,763 to 55,413
GFF4282
Position (kb) 52
53
54
55 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 52.023 kb on - strand at 52.023 kb on - strand at 52.131 kb on - strand at 52.177 kb on - strand at 52.177 kb on - strand at 52.255 kb on + strand, within GFF4280 at 52.255 kb on + strand, within GFF4280 at 52.257 kb on + strand, within GFF4280 at 52.258 kb on - strand, within GFF4280 at 52.258 kb on - strand, within GFF4280 at 52.258 kb on - strand, within GFF4280 at 52.512 kb on - strand, within GFF4280 at 52.512 kb on - strand, within GFF4280 at 52.538 kb on + strand, within GFF4280 at 52.706 kb on + strand, within GFF4280 at 52.706 kb on + strand, within GFF4280 at 52.837 kb on + strand, within GFF4280 at 52.838 kb on - strand, within GFF4280 at 52.868 kb on + strand at 52.868 kb on + strand at 52.869 kb on - strand at 53.155 kb on + strand, within GFF4281 at 53.155 kb on + strand, within GFF4281 at 53.156 kb on - strand, within GFF4281 at 53.156 kb on - strand, within GFF4281 at 53.156 kb on - strand, within GFF4281 at 53.156 kb on - strand, within GFF4281 at 53.230 kb on + strand, within GFF4281 at 53.230 kb on + strand, within GFF4281 at 53.230 kb on + strand, within GFF4281 at 53.231 kb on - strand, within GFF4281 at 53.231 kb on - strand, within GFF4281 at 53.231 kb on - strand, within GFF4281 at 53.528 kb on - strand, within GFF4281 at 53.528 kb on - strand, within GFF4281 at 53.548 kb on + strand, within GFF4281 at 53.566 kb on + strand, within GFF4281 at 53.566 kb on + strand, within GFF4281 at 53.566 kb on + strand, within GFF4281 at 53.566 kb on + strand, within GFF4281 at 53.567 kb on - strand, within GFF4281 at 53.567 kb on - strand, within GFF4281 at 53.672 kb on + strand, within GFF4281 at 53.675 kb on - strand, within GFF4281 at 53.905 kb on + strand, within GFF4281 at 53.905 kb on + strand, within GFF4281 at 54.275 kb on - strand, within GFF4281 at 54.520 kb on + strand at 54.944 kb on + strand, within GFF4282 at 55.469 kb on + strand at 55.469 kb on + strand at 55.470 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 52,023 - -0.7 52,023 - -0.8 52,131 - +0.3 52,177 - +0.1 52,177 - -0.1 52,255 + GFF4280 0.15 -0.8 52,255 + GFF4280 0.15 +0.0 52,257 + GFF4280 0.15 -0.7 52,258 - GFF4280 0.16 -0.3 52,258 - GFF4280 0.16 -0.3 52,258 - GFF4280 0.16 -0.4 52,512 - GFF4280 0.48 -0.5 52,512 - GFF4280 0.48 +0.9 52,538 + GFF4280 0.51 +0.5 52,706 + GFF4280 0.73 +0.3 52,706 + GFF4280 0.73 +0.6 52,837 + GFF4280 0.89 +0.0 52,838 - GFF4280 0.89 -0.4 52,868 + +0.0 52,868 + +0.2 52,869 - +0.9 53,155 + GFF4281 0.14 -0.7 53,155 + GFF4281 0.14 +0.1 53,156 - GFF4281 0.14 +0.4 53,156 - GFF4281 0.14 -0.2 53,156 - GFF4281 0.14 -0.6 53,156 - GFF4281 0.14 -0.1 53,230 + GFF4281 0.19 -0.5 53,230 + GFF4281 0.19 +0.0 53,230 + GFF4281 0.19 -1.1 53,231 - GFF4281 0.19 -2.7 53,231 - GFF4281 0.19 -0.3 53,231 - GFF4281 0.19 -0.4 53,528 - GFF4281 0.39 +0.5 53,528 - GFF4281 0.39 -1.6 53,548 + GFF4281 0.40 -0.3 53,566 + GFF4281 0.41 +0.3 53,566 + GFF4281 0.41 +0.1 53,566 + GFF4281 0.41 -1.1 53,566 + GFF4281 0.41 -0.7 53,567 - GFF4281 0.41 -0.8 53,567 - GFF4281 0.41 +2.1 53,672 + GFF4281 0.48 +0.8 53,675 - GFF4281 0.48 +3.0 53,905 + GFF4281 0.63 +0.4 53,905 + GFF4281 0.63 -0.7 54,275 - GFF4281 0.87 -0.2 54,520 + +0.5 54,944 + GFF4282 0.28 +0.1 55,469 + -0.1 55,469 + +1.0 55,470 - +0.4
Or see this region's nucleotide sequence