Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF357 and GFF358 are separated by 205 nucleotides GFF358 and GFF359 are separated by 93 nucleotides GFF359 and GFF360 are separated by 131 nucleotides
GFF357 - putative xanthine dehydrogenase subunit D, at 365,961 to 368,255
GFF357
GFF358 - hypothetical protein, at 368,461 to 369,030
GFF358
GFF359 - hypothetical protein, at 369,124 to 371,043
GFF359
GFF360 - hypothetical protein, at 371,175 to 372,896
GFF360
Position (kb) 369
370
371
372 Strain fitness (log2 ratio) -1
0
1 at 368.294 kb on - strand at 368.312 kb on + strand at 368.312 kb on + strand at 368.455 kb on + strand at 368.456 kb on - strand at 368.456 kb on - strand at 368.456 kb on - strand at 369.029 kb on + strand at 369.052 kb on + strand at 369.594 kb on - strand, within GFF359 at 370.068 kb on - strand, within GFF359 at 371.049 kb on + strand at 371.050 kb on - strand at 371.311 kb on + strand at 371.311 kb on + strand at 371.312 kb on - strand at 371.312 kb on - strand at 371.335 kb on + strand at 371.623 kb on - strand, within GFF360 at 371.623 kb on - strand, within GFF360 at 371.623 kb on - strand, within GFF360 at 371.623 kb on - strand, within GFF360
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 368,294 - -1.2 368,312 + -0.2 368,312 + -0.0 368,455 + +1.3 368,456 - -0.4 368,456 - +0.3 368,456 - +0.0 369,029 + +0.5 369,052 + +0.2 369,594 - GFF359 0.24 -0.6 370,068 - GFF359 0.49 -1.1 371,049 + -0.9 371,050 - -0.4 371,311 + -0.2 371,311 + +0.2 371,312 - +0.7 371,312 - -1.5 371,335 + -0.0 371,623 - GFF360 0.26 -0.0 371,623 - GFF360 0.26 -0.4 371,623 - GFF360 0.26 -1.2 371,623 - GFF360 0.26 -0.6
Or see this region's nucleotide sequence