Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3581 and GFF3582 overlap by 1 nucleotides GFF3582 and GFF3583 are separated by 156 nucleotides GFF3583 and GFF3584 are separated by 11 nucleotides GFF3584 and GFF3585 are separated by 230 nucleotides
GFF3581 - Phosphoribosylamine--glycine ligase, at 444,101 to 445,366
GFF3581
GFF3582 - hypothetical protein, at 445,366 to 445,794
GFF3582
GFF3583 - hypothetical protein, at 445,951 to 446,040
GFF3583
GFF3584 - putative oxidoreductase YjmC, at 446,052 to 447,137
GFF3584
GFF3585 - hypothetical protein, at 447,368 to 448,408
GFF3585
Position (kb) 446
447
448 Strain fitness (log2 ratio) -1
0
1
2 at 445.630 kb on + strand, within GFF3582 at 446.192 kb on + strand, within GFF3584 at 446.225 kb on + strand, within GFF3584 at 446.225 kb on + strand, within GFF3584 at 446.558 kb on - strand, within GFF3584 at 446.830 kb on + strand, within GFF3584 at 446.947 kb on + strand, within GFF3584 at 446.947 kb on + strand, within GFF3584 at 446.947 kb on + strand, within GFF3584 at 446.947 kb on + strand, within GFF3584 at 446.948 kb on - strand, within GFF3584 at 446.948 kb on - strand, within GFF3584 at 446.948 kb on - strand, within GFF3584 at 446.948 kb on - strand, within GFF3584 at 447.208 kb on + strand at 447.208 kb on + strand at 447.208 kb on + strand at 447.208 kb on + strand at 447.208 kb on + strand at 447.743 kb on + strand, within GFF3585 at 447.744 kb on - strand, within GFF3585 at 447.753 kb on + strand, within GFF3585 at 447.821 kb on + strand, within GFF3585 at 447.821 kb on + strand, within GFF3585 at 447.824 kb on + strand, within GFF3585 at 447.825 kb on - strand, within GFF3585 at 447.911 kb on + strand, within GFF3585 at 447.912 kb on - strand, within GFF3585 at 447.935 kb on + strand, within GFF3585 at 447.935 kb on + strand, within GFF3585 at 447.935 kb on + strand, within GFF3585 at 447.936 kb on - strand, within GFF3585 at 447.936 kb on - strand, within GFF3585
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 445,630 + GFF3582 0.62 -0.2 446,192 + GFF3584 0.13 -0.5 446,225 + GFF3584 0.16 +1.0 446,225 + GFF3584 0.16 +1.5 446,558 - GFF3584 0.47 +0.0 446,830 + GFF3584 0.72 -0.6 446,947 + GFF3584 0.82 +0.0 446,947 + GFF3584 0.82 -0.3 446,947 + GFF3584 0.82 -0.3 446,947 + GFF3584 0.82 +0.2 446,948 - GFF3584 0.83 -0.7 446,948 - GFF3584 0.83 -1.1 446,948 - GFF3584 0.83 -1.4 446,948 - GFF3584 0.83 -1.2 447,208 + +1.6 447,208 + -0.5 447,208 + +0.3 447,208 + +0.8 447,208 + +0.1 447,743 + GFF3585 0.36 -0.3 447,744 - GFF3585 0.36 +1.3 447,753 + GFF3585 0.37 +1.0 447,821 + GFF3585 0.44 +0.2 447,821 + GFF3585 0.44 -1.0 447,824 + GFF3585 0.44 -1.3 447,825 - GFF3585 0.44 +0.2 447,911 + GFF3585 0.52 +0.4 447,912 - GFF3585 0.52 -0.2 447,935 + GFF3585 0.54 +0.7 447,935 + GFF3585 0.54 +1.8 447,935 + GFF3585 0.54 -0.5 447,936 - GFF3585 0.55 +0.8 447,936 - GFF3585 0.55 -0.2
Or see this region's nucleotide sequence