Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3366 and GFF3367 are separated by 35 nucleotides GFF3367 and GFF3368 are separated by 46 nucleotides GFF3368 and GFF3369 are separated by 166 nucleotides
GFF3366 - hypothetical protein, at 210,889 to 212,151
GFF3366
GFF3367 - hypothetical protein, at 212,187 to 212,951
GFF3367
GFF3368 - L-lactate dehydrogenase, at 212,998 to 214,188
GFF3368
GFF3369 - hypothetical protein, at 214,355 to 215,344
GFF3369
Position (kb) 212
213
214
215 Strain fitness (log2 ratio) -2
-1
0
1
2 at 212.154 kb on + strand at 212.154 kb on + strand at 212.154 kb on + strand at 212.154 kb on + strand at 212.154 kb on + strand at 212.155 kb on - strand at 212.155 kb on - strand at 212.155 kb on - strand at 212.155 kb on - strand at 212.243 kb on - strand at 212.243 kb on - strand at 212.243 kb on - strand at 212.243 kb on - strand at 212.357 kb on - strand, within GFF3367 at 212.357 kb on - strand, within GFF3367 at 212.377 kb on + strand, within GFF3367 at 212.377 kb on + strand, within GFF3367 at 212.378 kb on - strand, within GFF3367 at 212.392 kb on + strand, within GFF3367 at 212.392 kb on + strand, within GFF3367 at 212.392 kb on + strand, within GFF3367 at 212.392 kb on + strand, within GFF3367 at 212.602 kb on + strand, within GFF3367 at 212.603 kb on - strand, within GFF3367 at 212.650 kb on + strand, within GFF3367 at 212.650 kb on + strand, within GFF3367 at 212.650 kb on + strand, within GFF3367 at 212.656 kb on + strand, within GFF3367 at 212.656 kb on + strand, within GFF3367 at 212.656 kb on + strand, within GFF3367 at 212.656 kb on + strand, within GFF3367 at 212.656 kb on + strand, within GFF3367 at 212.657 kb on - strand, within GFF3367 at 212.657 kb on - strand, within GFF3367 at 212.657 kb on - strand, within GFF3367 at 212.657 kb on - strand, within GFF3367 at 212.657 kb on - strand, within GFF3367 at 212.686 kb on + strand, within GFF3367 at 212.902 kb on + strand at 212.903 kb on - strand at 212.903 kb on - strand at 212.939 kb on - strand at 213.035 kb on + strand at 213.050 kb on - strand at 213.173 kb on + strand, within GFF3368 at 213.173 kb on + strand, within GFF3368 at 213.177 kb on + strand, within GFF3368 at 213.177 kb on + strand, within GFF3368 at 214.103 kb on + strand at 214.103 kb on + strand at 214.109 kb on + strand at 214.109 kb on + strand at 214.246 kb on + strand at 214.421 kb on + strand at 214.422 kb on - strand at 214.510 kb on + strand, within GFF3369 at 214.511 kb on - strand, within GFF3369 at 214.670 kb on + strand, within GFF3369 at 214.670 kb on + strand, within GFF3369 at 214.671 kb on - strand, within GFF3369 at 214.671 kb on - strand, within GFF3369 at 214.671 kb on - strand, within GFF3369 at 214.671 kb on - strand, within GFF3369 at 214.877 kb on + strand, within GFF3369 at 214.878 kb on - strand, within GFF3369 at 215.051 kb on + strand, within GFF3369 at 215.156 kb on - strand, within GFF3369 at 215.156 kb on - strand, within GFF3369
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 212,154 + +0.0 212,154 + -1.0 212,154 + -0.9 212,154 + -1.3 212,154 + +1.0 212,155 - +0.2 212,155 - +0.6 212,155 - -0.5 212,155 - +1.0 212,243 - -0.0 212,243 - -0.3 212,243 - +0.0 212,243 - -1.5 212,357 - GFF3367 0.22 +0.5 212,357 - GFF3367 0.22 +0.5 212,377 + GFF3367 0.25 +0.5 212,377 + GFF3367 0.25 -1.4 212,378 - GFF3367 0.25 -0.4 212,392 + GFF3367 0.27 -1.7 212,392 + GFF3367 0.27 +0.3 212,392 + GFF3367 0.27 -0.5 212,392 + GFF3367 0.27 -0.3 212,602 + GFF3367 0.54 -0.5 212,603 - GFF3367 0.54 -0.2 212,650 + GFF3367 0.61 -1.2 212,650 + GFF3367 0.61 +0.2 212,650 + GFF3367 0.61 +0.6 212,656 + GFF3367 0.61 -0.2 212,656 + GFF3367 0.61 +0.8 212,656 + GFF3367 0.61 +0.2 212,656 + GFF3367 0.61 +0.6 212,656 + GFF3367 0.61 +0.0 212,657 - GFF3367 0.61 -0.1 212,657 - GFF3367 0.61 -0.4 212,657 - GFF3367 0.61 +0.8 212,657 - GFF3367 0.61 -0.5 212,657 - GFF3367 0.61 -1.5 212,686 + GFF3367 0.65 +0.5 212,902 + -2.1 212,903 - +0.0 212,903 - -0.1 212,939 - +0.2 213,035 + -1.3 213,050 - -0.4 213,173 + GFF3368 0.15 -0.2 213,173 + GFF3368 0.15 -0.3 213,177 + GFF3368 0.15 -0.4 213,177 + GFF3368 0.15 +0.3 214,103 + +0.0 214,103 + -2.4 214,109 + -0.5 214,109 + -0.3 214,246 + -0.2 214,421 + -0.6 214,422 - -0.5 214,510 + GFF3369 0.16 -1.0 214,511 - GFF3369 0.16 +1.8 214,670 + GFF3369 0.32 -1.4 214,670 + GFF3369 0.32 -1.0 214,671 - GFF3369 0.32 -0.8 214,671 - GFF3369 0.32 -1.5 214,671 - GFF3369 0.32 -0.8 214,671 - GFF3369 0.32 +1.0 214,877 + GFF3369 0.53 -0.5 214,878 - GFF3369 0.53 -0.3 215,051 + GFF3369 0.70 -0.5 215,156 - GFF3369 0.81 -1.8 215,156 - GFF3369 0.81 -0.1
Or see this region's nucleotide sequence