Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3314 and GFF3315 are separated by 3 nucleotides GFF3315 and GFF3316 are separated by 1 nucleotides GFF3316 and GFF3317 are separated by 22 nucleotides
GFF3314 - hypothetical protein, at 154,184 to 155,506
GFF3314
GFF3315 - Lactose transport system permease protein LacF, at 155,510 to 156,469
GFF3315
GFF3316 - Diacetylchitobiose uptake system permease protein NgcG, at 156,471 to 157,331
GFF3316
GFF3317 - Oligosaccharides import ATP-binding protein MsmX, at 157,354 to 158,511
GFF3317
Position (kb) 155
156
157 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 154.550 kb on + strand, within GFF3314 at 154.551 kb on - strand, within GFF3314 at 154.614 kb on - strand, within GFF3314 at 154.614 kb on - strand, within GFF3314 at 154.634 kb on + strand, within GFF3314 at 154.635 kb on - strand, within GFF3314 at 154.635 kb on - strand, within GFF3314 at 154.636 kb on + strand, within GFF3314 at 154.637 kb on - strand, within GFF3314 at 154.637 kb on - strand, within GFF3314 at 154.650 kb on - strand, within GFF3314 at 154.652 kb on + strand, within GFF3314 at 154.653 kb on - strand, within GFF3314 at 154.850 kb on + strand, within GFF3314 at 154.850 kb on + strand, within GFF3314 at 154.851 kb on - strand, within GFF3314 at 154.944 kb on - strand, within GFF3314 at 154.944 kb on - strand, within GFF3314 at 154.988 kb on + strand, within GFF3314 at 154.988 kb on + strand, within GFF3314 at 154.994 kb on + strand, within GFF3314 at 154.994 kb on + strand, within GFF3314 at 154.994 kb on + strand, within GFF3314 at 154.994 kb on + strand, within GFF3314 at 154.995 kb on - strand, within GFF3314 at 154.995 kb on - strand, within GFF3314 at 154.995 kb on - strand, within GFF3314 at 155.177 kb on + strand, within GFF3314 at 155.178 kb on - strand, within GFF3314 at 155.324 kb on + strand, within GFF3314 at 155.363 kb on + strand, within GFF3314 at 155.364 kb on - strand, within GFF3314 at 155.364 kb on - strand, within GFF3314 at 155.364 kb on - strand, within GFF3314 at 155.387 kb on + strand at 155.388 kb on - strand at 155.414 kb on + strand at 155.414 kb on + strand at 155.415 kb on - strand at 155.415 kb on - strand at 155.415 kb on - strand at 155.645 kb on + strand, within GFF3315 at 155.663 kb on + strand, within GFF3315 at 155.684 kb on + strand, within GFF3315 at 155.685 kb on - strand, within GFF3315 at 155.685 kb on - strand, within GFF3315 at 155.742 kb on - strand, within GFF3315 at 155.858 kb on + strand, within GFF3315 at 155.921 kb on + strand, within GFF3315 at 155.921 kb on + strand, within GFF3315 at 155.921 kb on + strand, within GFF3315 at 155.922 kb on - strand, within GFF3315 at 155.922 kb on - strand, within GFF3315 at 155.954 kb on + strand, within GFF3315 at 155.954 kb on + strand, within GFF3315 at 155.955 kb on - strand, within GFF3315 at 155.955 kb on - strand, within GFF3315 at 155.961 kb on - strand, within GFF3315 at 155.979 kb on - strand, within GFF3315 at 156.188 kb on + strand, within GFF3315 at 156.189 kb on - strand, within GFF3315 at 156.189 kb on - strand, within GFF3315 at 156.189 kb on - strand, within GFF3315 at 156.189 kb on - strand, within GFF3315 at 156.189 kb on - strand, within GFF3315 at 156.189 kb on - strand, within GFF3315 at 156.230 kb on + strand, within GFF3315 at 156.230 kb on + strand, within GFF3315 at 156.231 kb on - strand, within GFF3315 at 156.231 kb on - strand, within GFF3315 at 156.231 kb on - strand, within GFF3315 at 156.326 kb on + strand, within GFF3315 at 156.326 kb on + strand, within GFF3315 at 156.326 kb on + strand, within GFF3315 at 156.326 kb on + strand, within GFF3315 at 156.332 kb on + strand, within GFF3315 at 156.333 kb on - strand, within GFF3315 at 156.333 kb on - strand, within GFF3315 at 156.333 kb on - strand, within GFF3315 at 156.333 kb on - strand, within GFF3315 at 156.333 kb on - strand, within GFF3315 at 156.558 kb on + strand, within GFF3316 at 156.559 kb on - strand, within GFF3316 at 156.567 kb on + strand, within GFF3316 at 156.567 kb on + strand, within GFF3316 at 156.567 kb on + strand, within GFF3316 at 156.567 kb on + strand, within GFF3316 at 156.567 kb on + strand, within GFF3316 at 156.568 kb on - strand, within GFF3316 at 156.568 kb on - strand, within GFF3316 at 156.568 kb on - strand, within GFF3316 at 156.568 kb on - strand, within GFF3316 at 156.639 kb on + strand, within GFF3316 at 156.639 kb on + strand, within GFF3316 at 156.639 kb on + strand, within GFF3316 at 156.639 kb on + strand, within GFF3316 at 156.640 kb on - strand, within GFF3316 at 156.640 kb on - strand, within GFF3316 at 156.708 kb on + strand, within GFF3316 at 156.708 kb on + strand, within GFF3316 at 156.709 kb on - strand, within GFF3316 at 156.709 kb on - strand, within GFF3316 at 156.795 kb on + strand, within GFF3316 at 156.823 kb on - strand, within GFF3316 at 156.880 kb on - strand, within GFF3316 at 156.897 kb on + strand, within GFF3316 at 156.897 kb on + strand, within GFF3316 at 156.898 kb on - strand, within GFF3316 at 156.898 kb on - strand, within GFF3316 at 156.900 kb on - strand, within GFF3316 at 156.906 kb on + strand, within GFF3316 at 156.906 kb on + strand, within GFF3316 at 156.906 kb on + strand, within GFF3316 at 156.936 kb on + strand, within GFF3316 at 156.938 kb on + strand, within GFF3316 at 156.939 kb on - strand, within GFF3316 at 156.939 kb on - strand, within GFF3316 at 156.966 kb on + strand, within GFF3316 at 156.966 kb on + strand, within GFF3316 at 156.967 kb on - strand, within GFF3316 at 157.276 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 154,550 + GFF3314 0.28 -1.2 154,551 - GFF3314 0.28 -1.3 154,614 - GFF3314 0.33 +0.7 154,614 - GFF3314 0.33 +0.4 154,634 + GFF3314 0.34 +0.7 154,635 - GFF3314 0.34 +0.5 154,635 - GFF3314 0.34 +0.1 154,636 + GFF3314 0.34 +0.7 154,637 - GFF3314 0.34 -0.3 154,637 - GFF3314 0.34 -0.8 154,650 - GFF3314 0.35 -0.1 154,652 + GFF3314 0.35 +0.3 154,653 - GFF3314 0.35 +0.3 154,850 + GFF3314 0.50 -0.0 154,850 + GFF3314 0.50 -0.3 154,851 - GFF3314 0.50 -0.3 154,944 - GFF3314 0.57 +0.2 154,944 - GFF3314 0.57 +2.6 154,988 + GFF3314 0.61 -1.5 154,988 + GFF3314 0.61 -0.1 154,994 + GFF3314 0.61 -0.9 154,994 + GFF3314 0.61 -1.3 154,994 + GFF3314 0.61 -0.7 154,994 + GFF3314 0.61 -3.4 154,995 - GFF3314 0.61 -1.6 154,995 - GFF3314 0.61 -1.6 154,995 - GFF3314 0.61 +0.0 155,177 + GFF3314 0.75 -0.0 155,178 - GFF3314 0.75 +0.5 155,324 + GFF3314 0.86 +0.4 155,363 + GFF3314 0.89 -0.9 155,364 - GFF3314 0.89 -0.7 155,364 - GFF3314 0.89 -0.2 155,364 - GFF3314 0.89 +0.9 155,387 + -0.4 155,388 - +0.4 155,414 + -1.0 155,414 + -0.2 155,415 - -0.2 155,415 - +0.5 155,415 - -0.8 155,645 + GFF3315 0.14 +0.3 155,663 + GFF3315 0.16 +0.6 155,684 + GFF3315 0.18 -0.8 155,685 - GFF3315 0.18 -1.2 155,685 - GFF3315 0.18 +0.5 155,742 - GFF3315 0.24 -0.1 155,858 + GFF3315 0.36 -1.5 155,921 + GFF3315 0.43 +0.9 155,921 + GFF3315 0.43 +1.7 155,921 + GFF3315 0.43 -0.3 155,922 - GFF3315 0.43 +0.8 155,922 - GFF3315 0.43 +0.1 155,954 + GFF3315 0.46 +0.4 155,954 + GFF3315 0.46 +0.3 155,955 - GFF3315 0.46 +0.3 155,955 - GFF3315 0.46 +0.5 155,961 - GFF3315 0.47 +0.3 155,979 - GFF3315 0.49 +0.6 156,188 + GFF3315 0.71 +0.3 156,189 - GFF3315 0.71 +0.9 156,189 - GFF3315 0.71 -0.5 156,189 - GFF3315 0.71 +0.1 156,189 - GFF3315 0.71 -1.5 156,189 - GFF3315 0.71 +1.3 156,189 - GFF3315 0.71 -0.6 156,230 + GFF3315 0.75 +1.1 156,230 + GFF3315 0.75 +1.2 156,231 - GFF3315 0.75 -1.2 156,231 - GFF3315 0.75 -0.7 156,231 - GFF3315 0.75 -0.2 156,326 + GFF3315 0.85 -0.1 156,326 + GFF3315 0.85 +0.5 156,326 + GFF3315 0.85 +0.9 156,326 + GFF3315 0.85 -0.4 156,332 + GFF3315 0.86 +0.8 156,333 - GFF3315 0.86 -0.2 156,333 - GFF3315 0.86 +0.5 156,333 - GFF3315 0.86 -1.2 156,333 - GFF3315 0.86 -2.5 156,333 - GFF3315 0.86 +0.3 156,558 + GFF3316 0.10 -1.2 156,559 - GFF3316 0.10 -0.0 156,567 + GFF3316 0.11 -1.1 156,567 + GFF3316 0.11 -0.2 156,567 + GFF3316 0.11 +0.9 156,567 + GFF3316 0.11 -1.0 156,567 + GFF3316 0.11 -0.7 156,568 - GFF3316 0.11 +1.0 156,568 - GFF3316 0.11 +1.6 156,568 - GFF3316 0.11 -0.8 156,568 - GFF3316 0.11 +1.8 156,639 + GFF3316 0.20 -0.3 156,639 + GFF3316 0.20 -0.0 156,639 + GFF3316 0.20 +0.1 156,639 + GFF3316 0.20 -0.3 156,640 - GFF3316 0.20 -0.6 156,640 - GFF3316 0.20 -0.7 156,708 + GFF3316 0.28 -0.7 156,708 + GFF3316 0.28 -0.0 156,709 - GFF3316 0.28 -1.6 156,709 - GFF3316 0.28 -1.5 156,795 + GFF3316 0.38 -0.2 156,823 - GFF3316 0.41 +0.3 156,880 - GFF3316 0.48 +0.4 156,897 + GFF3316 0.49 +0.3 156,897 + GFF3316 0.49 -0.1 156,898 - GFF3316 0.50 -0.4 156,898 - GFF3316 0.50 +0.9 156,900 - GFF3316 0.50 -0.1 156,906 + GFF3316 0.51 -0.9 156,906 + GFF3316 0.51 +1.5 156,906 + GFF3316 0.51 -1.0 156,936 + GFF3316 0.54 -0.1 156,938 + GFF3316 0.54 -0.1 156,939 - GFF3316 0.54 +0.1 156,939 - GFF3316 0.54 +0.7 156,966 + GFF3316 0.57 -0.2 156,966 + GFF3316 0.57 -0.6 156,967 - GFF3316 0.58 +0.6 157,276 - -0.8
Or see this region's nucleotide sequence