Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF314 and GFF315 are separated by 277 nucleotides GFF315 and GFF316 overlap by 4 nucleotides GFF316 and GFF317 are separated by 7 nucleotides
GFF314 - hypothetical protein, at 324,925 to 325,281
GFF314
GFF315 - hypothetical protein, at 325,559 to 325,924
GFF315
GFF316 - hypothetical protein, at 325,921 to 327,636
GFF316
GFF317 - hypothetical protein, at 327,644 to 328,879
GFF317
Position (kb) 325
326
327
328 Strain fitness (log2 ratio) -1
0
1
2 at 324.922 kb on - strand at 324.922 kb on - strand at 324.922 kb on - strand at 325.048 kb on + strand, within GFF314 at 325.048 kb on + strand, within GFF314 at 325.049 kb on - strand, within GFF314 at 325.049 kb on - strand, within GFF314 at 325.049 kb on - strand, within GFF314 at 325.049 kb on - strand, within GFF314 at 325.331 kb on + strand at 325.332 kb on - strand at 325.332 kb on - strand at 325.332 kb on - strand at 325.332 kb on - strand at 325.892 kb on + strand at 325.892 kb on + strand at 325.892 kb on + strand at 325.892 kb on + strand at 325.892 kb on + strand at 325.892 kb on + strand at 325.892 kb on + strand at 325.893 kb on - strand at 325.893 kb on - strand at 325.893 kb on - strand at 325.893 kb on - strand at 325.893 kb on - strand at 325.893 kb on - strand at 326.344 kb on + strand, within GFF316 at 326.344 kb on + strand, within GFF316 at 326.653 kb on + strand, within GFF316 at 326.653 kb on + strand, within GFF316 at 326.653 kb on + strand, within GFF316 at 326.654 kb on - strand, within GFF316 at 326.654 kb on - strand, within GFF316 at 326.713 kb on + strand, within GFF316 at 326.982 kb on + strand, within GFF316 at 326.982 kb on + strand, within GFF316 at 326.982 kb on + strand, within GFF316 at 327.072 kb on + strand, within GFF316 at 327.073 kb on - strand, within GFF316 at 327.073 kb on - strand, within GFF316 at 327.373 kb on + strand, within GFF316 at 327.373 kb on + strand, within GFF316 at 327.373 kb on + strand, within GFF316 at 327.373 kb on + strand, within GFF316 at 327.374 kb on - strand, within GFF316 at 327.374 kb on - strand, within GFF316 at 327.502 kb on + strand at 327.503 kb on - strand at 327.503 kb on - strand at 327.553 kb on + strand at 327.607 kb on + strand at 327.608 kb on - strand at 328.106 kb on + strand, within GFF317 at 328.106 kb on + strand, within GFF317 at 328.106 kb on + strand, within GFF317 at 328.106 kb on + strand, within GFF317 at 328.106 kb on + strand, within GFF317 at 328.107 kb on - strand, within GFF317 at 328.107 kb on - strand, within GFF317 at 328.107 kb on - strand, within GFF317 at 328.112 kb on + strand, within GFF317 at 328.113 kb on - strand, within GFF317 at 328.157 kb on - strand, within GFF317 at 328.178 kb on - strand, within GFF317 at 328.230 kb on + strand, within GFF317 at 328.230 kb on + strand, within GFF317 at 328.231 kb on - strand, within GFF317 at 328.231 kb on - strand, within GFF317 at 328.231 kb on - strand, within GFF317 at 328.334 kb on + strand, within GFF317 at 328.334 kb on + strand, within GFF317 at 328.334 kb on + strand, within GFF317 at 328.334 kb on + strand, within GFF317 at 328.335 kb on - strand, within GFF317 at 328.335 kb on - strand, within GFF317 at 328.418 kb on + strand, within GFF317 at 328.418 kb on + strand, within GFF317 at 328.418 kb on + strand, within GFF317 at 328.419 kb on - strand, within GFF317 at 328.419 kb on - strand, within GFF317 at 328.419 kb on - strand, within GFF317 at 328.461 kb on - strand, within GFF317 at 328.583 kb on + strand, within GFF317 at 328.583 kb on + strand, within GFF317 at 328.583 kb on + strand, within GFF317
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 324,922 - -0.1 324,922 - +0.7 324,922 - +1.8 325,048 + GFF314 0.34 +0.8 325,048 + GFF314 0.34 -0.1 325,049 - GFF314 0.35 -0.3 325,049 - GFF314 0.35 +1.6 325,049 - GFF314 0.35 +1.2 325,049 - GFF314 0.35 -0.6 325,331 + +0.3 325,332 - +1.0 325,332 - +0.7 325,332 - +0.3 325,332 - -0.4 325,892 + +1.7 325,892 + -0.1 325,892 + +0.7 325,892 + +0.6 325,892 + +1.6 325,892 + +0.8 325,892 + -1.5 325,893 - -0.0 325,893 - -0.0 325,893 - +0.7 325,893 - -1.3 325,893 - +0.5 325,893 - +0.6 326,344 + GFF316 0.25 +0.3 326,344 + GFF316 0.25 -1.3 326,653 + GFF316 0.43 +0.4 326,653 + GFF316 0.43 +1.7 326,653 + GFF316 0.43 +0.9 326,654 - GFF316 0.43 +0.7 326,654 - GFF316 0.43 -0.2 326,713 + GFF316 0.46 +0.1 326,982 + GFF316 0.62 +0.1 326,982 + GFF316 0.62 +0.3 326,982 + GFF316 0.62 +0.4 327,072 + GFF316 0.67 -0.9 327,073 - GFF316 0.67 +0.6 327,073 - GFF316 0.67 -0.3 327,373 + GFF316 0.85 +0.2 327,373 + GFF316 0.85 +0.7 327,373 + GFF316 0.85 -0.0 327,373 + GFF316 0.85 -0.8 327,374 - GFF316 0.85 +1.2 327,374 - GFF316 0.85 +0.7 327,502 + -0.3 327,503 - -0.9 327,503 - +0.3 327,553 + +1.0 327,607 + -0.2 327,608 - +0.1 328,106 + GFF317 0.37 +1.5 328,106 + GFF317 0.37 -0.8 328,106 + GFF317 0.37 +0.8 328,106 + GFF317 0.37 -0.8 328,106 + GFF317 0.37 +0.1 328,107 - GFF317 0.37 +0.0 328,107 - GFF317 0.37 -1.7 328,107 - GFF317 0.37 +0.9 328,112 + GFF317 0.38 +1.1 328,113 - GFF317 0.38 +1.5 328,157 - GFF317 0.42 -0.8 328,178 - GFF317 0.43 +0.1 328,230 + GFF317 0.47 +1.0 328,230 + GFF317 0.47 +1.1 328,231 - GFF317 0.47 +0.4 328,231 - GFF317 0.47 -0.4 328,231 - GFF317 0.47 +1.0 328,334 + GFF317 0.56 +1.2 328,334 + GFF317 0.56 -0.8 328,334 + GFF317 0.56 +0.5 328,334 + GFF317 0.56 -0.3 328,335 - GFF317 0.56 +0.8 328,335 - GFF317 0.56 -0.7 328,418 + GFF317 0.63 +1.0 328,418 + GFF317 0.63 +0.7 328,418 + GFF317 0.63 -1.3 328,419 - GFF317 0.63 +0.2 328,419 - GFF317 0.63 +1.0 328,419 - GFF317 0.63 +0.1 328,461 - GFF317 0.66 +0.6 328,583 + GFF317 0.76 -0.2 328,583 + GFF317 0.76 +0.4 328,583 + GFF317 0.76 +0.0
Or see this region's nucleotide sequence