Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF312 and GFF313 are separated by 321 nucleotides GFF313 and GFF314 are separated by 82 nucleotides GFF314 and GFF315 are separated by 277 nucleotides
GFF312 - hypothetical protein, at 321,048 to 323,903
GFF312
GFF313 - hypothetical protein, at 324,225 to 324,842
GFF313
GFF314 - hypothetical protein, at 324,925 to 325,281
GFF314
GFF315 - hypothetical protein, at 325,559 to 325,924
GFF315
Position (kb) 324
325 Strain fitness (log2 ratio) -2
-1
0
1
2 at 323.238 kb on + strand, within GFF312 at 323.238 kb on + strand, within GFF312 at 323.238 kb on + strand, within GFF312 at 323.239 kb on - strand, within GFF312 at 323.239 kb on - strand, within GFF312 at 323.239 kb on - strand, within GFF312 at 323.387 kb on + strand, within GFF312 at 323.387 kb on + strand, within GFF312 at 323.387 kb on + strand, within GFF312 at 323.388 kb on - strand, within GFF312 at 323.388 kb on - strand, within GFF312 at 323.426 kb on + strand, within GFF312 at 323.426 kb on + strand, within GFF312 at 323.427 kb on - strand, within GFF312 at 323.571 kb on + strand, within GFF312 at 323.572 kb on - strand, within GFF312 at 323.572 kb on - strand, within GFF312 at 323.572 kb on - strand, within GFF312 at 323.572 kb on - strand, within GFF312 at 323.572 kb on - strand, within GFF312 at 323.572 kb on - strand, within GFF312 at 323.626 kb on - strand at 323.833 kb on - strand at 323.833 kb on - strand at 323.833 kb on - strand at 324.000 kb on + strand at 324.000 kb on + strand at 324.068 kb on - strand at 324.095 kb on + strand at 324.098 kb on - strand at 324.136 kb on + strand at 324.265 kb on - strand at 324.265 kb on - strand at 324.672 kb on + strand, within GFF313 at 324.672 kb on + strand, within GFF313 at 324.673 kb on - strand, within GFF313 at 324.673 kb on - strand, within GFF313 at 324.673 kb on - strand, within GFF313 at 324.673 kb on - strand, within GFF313 at 324.734 kb on + strand, within GFF313 at 324.793 kb on - strand at 324.835 kb on + strand at 324.835 kb on + strand at 324.836 kb on - strand at 324.845 kb on - strand at 324.888 kb on + strand at 324.913 kb on + strand at 324.914 kb on - strand at 324.914 kb on - strand at 324.914 kb on - strand at 324.922 kb on - strand at 324.922 kb on - strand at 324.922 kb on - strand at 325.048 kb on + strand, within GFF314 at 325.048 kb on + strand, within GFF314 at 325.049 kb on - strand, within GFF314 at 325.049 kb on - strand, within GFF314 at 325.049 kb on - strand, within GFF314 at 325.049 kb on - strand, within GFF314 at 325.331 kb on + strand at 325.332 kb on - strand at 325.332 kb on - strand at 325.332 kb on - strand at 325.332 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 323,238 + GFF312 0.77 -0.8 323,238 + GFF312 0.77 +0.3 323,238 + GFF312 0.77 +1.0 323,239 - GFF312 0.77 -1.4 323,239 - GFF312 0.77 +1.2 323,239 - GFF312 0.77 +0.6 323,387 + GFF312 0.82 -0.0 323,387 + GFF312 0.82 -0.3 323,387 + GFF312 0.82 -0.1 323,388 - GFF312 0.82 -0.6 323,388 - GFF312 0.82 -0.2 323,426 + GFF312 0.83 +0.6 323,426 + GFF312 0.83 +0.5 323,427 - GFF312 0.83 -1.0 323,571 + GFF312 0.88 +1.0 323,572 - GFF312 0.88 -0.0 323,572 - GFF312 0.88 +0.5 323,572 - GFF312 0.88 +1.1 323,572 - GFF312 0.88 +0.3 323,572 - GFF312 0.88 -0.1 323,572 - GFF312 0.88 -0.3 323,626 - -1.1 323,833 - -1.3 323,833 - -1.5 323,833 - +0.0 324,000 + +0.2 324,000 + -0.4 324,068 - -0.8 324,095 + +0.2 324,098 - +0.7 324,136 + -0.6 324,265 - +0.2 324,265 - +0.6 324,672 + GFF313 0.72 -0.2 324,672 + GFF313 0.72 +1.0 324,673 - GFF313 0.72 -2.3 324,673 - GFF313 0.72 +0.5 324,673 - GFF313 0.72 -0.3 324,673 - GFF313 0.72 +0.1 324,734 + GFF313 0.82 +0.4 324,793 - +1.2 324,835 + +0.2 324,835 + +2.0 324,836 - +0.2 324,845 - +0.8 324,888 + +1.7 324,913 + +0.6 324,914 - +0.6 324,914 - -0.1 324,914 - +0.4 324,922 - -0.1 324,922 - +0.7 324,922 - +1.8 325,048 + GFF314 0.34 +0.8 325,048 + GFF314 0.34 -0.1 325,049 - GFF314 0.35 -0.3 325,049 - GFF314 0.35 +1.6 325,049 - GFF314 0.35 +1.2 325,049 - GFF314 0.35 -0.6 325,331 + +0.3 325,332 - +1.0 325,332 - +0.7 325,332 - +0.3 325,332 - -0.4
Or see this region's nucleotide sequence