Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2984 and GFF2985 are separated by 19 nucleotides GFF2985 and GFF2986 are separated by 1 nucleotides GFF2986 and GFF2987 are separated by 10 nucleotides GFF2987 and GFF2988 are separated by 504 nucleotides
GFF2984 - Potassium-transporting ATPase ATP-binding subunit, at 708,837 to 710,900
GFF2984
GFF2985 - hypothetical protein, at 710,920 to 711,060
GFF2985
GFF2986 - Potassium-transporting ATPase potassium-binding subunit, at 711,062 to 712,771
GFF2986
GFF2987 - hypothetical protein, at 712,782 to 712,871
GFF2987
GFF2988 - High-affinity branched-chain amino acid transport ATP-binding protein LivF, at 713,376 to 714,098
GFF2988
Position (kb) 711
712
713 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 710.173 kb on + strand, within GFF2984 at 710.174 kb on - strand, within GFF2984 at 710.300 kb on + strand, within GFF2984 at 710.300 kb on + strand, within GFF2984 at 710.301 kb on - strand, within GFF2984 at 710.301 kb on - strand, within GFF2984 at 710.301 kb on - strand, within GFF2984 at 710.301 kb on - strand, within GFF2984 at 711.183 kb on - strand at 711.321 kb on + strand, within GFF2986 at 711.321 kb on + strand, within GFF2986 at 711.322 kb on - strand, within GFF2986 at 711.322 kb on - strand, within GFF2986 at 711.552 kb on + strand, within GFF2986 at 711.553 kb on - strand, within GFF2986 at 711.553 kb on - strand, within GFF2986 at 711.553 kb on - strand, within GFF2986 at 711.621 kb on + strand, within GFF2986 at 711.621 kb on + strand, within GFF2986 at 711.621 kb on + strand, within GFF2986 at 711.622 kb on - strand, within GFF2986 at 711.622 kb on - strand, within GFF2986 at 711.622 kb on - strand, within GFF2986 at 711.622 kb on - strand, within GFF2986 at 711.622 kb on - strand, within GFF2986 at 711.865 kb on - strand, within GFF2986 at 712.158 kb on + strand, within GFF2986 at 712.158 kb on + strand, within GFF2986 at 712.159 kb on - strand, within GFF2986 at 712.159 kb on - strand, within GFF2986 at 712.206 kb on + strand, within GFF2986 at 712.207 kb on - strand, within GFF2986 at 712.207 kb on - strand, within GFF2986 at 712.233 kb on + strand, within GFF2986 at 712.233 kb on + strand, within GFF2986 at 712.234 kb on - strand, within GFF2986 at 712.234 kb on - strand, within GFF2986 at 712.383 kb on + strand, within GFF2986 at 712.408 kb on - strand, within GFF2986 at 712.527 kb on + strand, within GFF2986 at 712.527 kb on + strand, within GFF2986 at 712.528 kb on - strand, within GFF2986 at 712.575 kb on + strand, within GFF2986 at 712.575 kb on + strand, within GFF2986 at 712.575 kb on + strand, within GFF2986 at 712.576 kb on - strand, within GFF2986 at 712.576 kb on - strand, within GFF2986 at 712.696 kb on - strand at 712.819 kb on + strand, within GFF2987 at 712.820 kb on - strand, within GFF2987 at 712.820 kb on - strand, within GFF2987 at 712.909 kb on - strand at 712.909 kb on - strand at 712.925 kb on - strand at 712.948 kb on + strand at 713.395 kb on + strand at 713.473 kb on + strand, within GFF2988 at 713.473 kb on + strand, within GFF2988 at 713.473 kb on + strand, within GFF2988 at 713.474 kb on - strand, within GFF2988
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 710,173 + GFF2984 0.65 +0.3 710,174 - GFF2984 0.65 -1.2 710,300 + GFF2984 0.71 -0.4 710,300 + GFF2984 0.71 -0.4 710,301 - GFF2984 0.71 -1.0 710,301 - GFF2984 0.71 -0.6 710,301 - GFF2984 0.71 -0.4 710,301 - GFF2984 0.71 +0.5 711,183 - +0.4 711,321 + GFF2986 0.15 +0.1 711,321 + GFF2986 0.15 -0.2 711,322 - GFF2986 0.15 -0.3 711,322 - GFF2986 0.15 +0.3 711,552 + GFF2986 0.29 -1.7 711,553 - GFF2986 0.29 -0.0 711,553 - GFF2986 0.29 -0.8 711,553 - GFF2986 0.29 -0.4 711,621 + GFF2986 0.33 -0.4 711,621 + GFF2986 0.33 +0.1 711,621 + GFF2986 0.33 +0.3 711,622 - GFF2986 0.33 -1.0 711,622 - GFF2986 0.33 +0.7 711,622 - GFF2986 0.33 -0.3 711,622 - GFF2986 0.33 -0.2 711,622 - GFF2986 0.33 -1.9 711,865 - GFF2986 0.47 -2.2 712,158 + GFF2986 0.64 +0.3 712,158 + GFF2986 0.64 +1.0 712,159 - GFF2986 0.64 -3.4 712,159 - GFF2986 0.64 +0.4 712,206 + GFF2986 0.67 +0.2 712,207 - GFF2986 0.67 -0.4 712,207 - GFF2986 0.67 -0.1 712,233 + GFF2986 0.68 +0.6 712,233 + GFF2986 0.68 -0.3 712,234 - GFF2986 0.69 +0.8 712,234 - GFF2986 0.69 -0.4 712,383 + GFF2986 0.77 -1.0 712,408 - GFF2986 0.79 -0.9 712,527 + GFF2986 0.86 +0.0 712,527 + GFF2986 0.86 +0.4 712,528 - GFF2986 0.86 +0.0 712,575 + GFF2986 0.88 +1.7 712,575 + GFF2986 0.88 -1.8 712,575 + GFF2986 0.88 -1.5 712,576 - GFF2986 0.89 +0.2 712,576 - GFF2986 0.89 +0.2 712,696 - +0.8 712,819 + GFF2987 0.41 +0.4 712,820 - GFF2987 0.42 +0.0 712,820 - GFF2987 0.42 -0.4 712,909 - -0.3 712,909 - -0.8 712,925 - -1.0 712,948 + -0.3 713,395 + -0.0 713,473 + GFF2988 0.13 +0.0 713,473 + GFF2988 0.13 +0.3 713,473 + GFF2988 0.13 +0.4 713,474 - GFF2988 0.14 +1.6
Or see this region's nucleotide sequence