Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2976 and GFF2977 are separated by 177 nucleotides GFF2977 and GFF2978 are separated by 46 nucleotides GFF2978 and GFF2979 are separated by 41 nucleotides GFF2979 and GFF2980 are separated by 7 nucleotides
GFF2976 - hypothetical protein, at 700,740 to 701,702
GFF2976
GFF2977 - hypothetical protein, at 701,880 to 702,374
GFF2977
GFF2978 - hypothetical protein, at 702,421 to 703,332
GFF2978
GFF2979 - Protein YobA, at 703,374 to 703,739
GFF2979
GFF2980 - hypothetical protein, at 703,747 to 704,649
GFF2980
Position (kb) 702
703
704 Strain fitness (log2 ratio) -1
0
1
2 at 701.742 kb on + strand at 702.592 kb on + strand, within GFF2978 at 702.592 kb on + strand, within GFF2978 at 702.592 kb on + strand, within GFF2978 at 702.593 kb on - strand, within GFF2978 at 702.628 kb on + strand, within GFF2978 at 702.629 kb on - strand, within GFF2978 at 702.629 kb on - strand, within GFF2978 at 702.629 kb on - strand, within GFF2978 at 702.640 kb on + strand, within GFF2978 at 702.641 kb on - strand, within GFF2978 at 702.841 kb on + strand, within GFF2978 at 702.842 kb on - strand, within GFF2978 at 702.842 kb on - strand, within GFF2978 at 702.842 kb on - strand, within GFF2978 at 702.866 kb on - strand, within GFF2978 at 702.866 kb on - strand, within GFF2978 at 703.025 kb on - strand, within GFF2978 at 703.025 kb on - strand, within GFF2978 at 703.025 kb on - strand, within GFF2978 at 703.036 kb on + strand, within GFF2978 at 703.663 kb on - strand, within GFF2979 at 703.737 kb on + strand at 703.737 kb on + strand at 703.737 kb on + strand at 703.738 kb on - strand at 703.738 kb on - strand at 703.738 kb on - strand at 703.738 kb on - strand at 703.776 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 701,742 + -0.2 702,592 + GFF2978 0.19 -0.1 702,592 + GFF2978 0.19 +0.8 702,592 + GFF2978 0.19 -1.1 702,593 - GFF2978 0.19 -0.5 702,628 + GFF2978 0.23 +0.0 702,629 - GFF2978 0.23 +1.8 702,629 - GFF2978 0.23 -0.2 702,629 - GFF2978 0.23 -0.9 702,640 + GFF2978 0.24 -0.8 702,641 - GFF2978 0.24 +0.0 702,841 + GFF2978 0.46 -0.1 702,842 - GFF2978 0.46 +0.2 702,842 - GFF2978 0.46 +0.5 702,842 - GFF2978 0.46 +1.0 702,866 - GFF2978 0.49 -0.7 702,866 - GFF2978 0.49 -0.1 703,025 - GFF2978 0.66 +0.7 703,025 - GFF2978 0.66 -0.5 703,025 - GFF2978 0.66 +0.3 703,036 + GFF2978 0.67 +1.4 703,663 - GFF2979 0.79 +0.6 703,737 + -0.5 703,737 + -0.3 703,737 + -0.6 703,738 - -0.2 703,738 - -0.8 703,738 - -1.6 703,738 - -1.1 703,776 + -0.1
Or see this region's nucleotide sequence