Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2930 and GFF2931 are separated by 171 nucleotides GFF2931 and GFF2932 are separated by 109 nucleotides GFF2932 and GFF2933 are separated by 528 nucleotides
GFF2930 - hypothetical protein, at 651,804 to 653,174
GFF2930
GFF2931 - hypothetical protein, at 653,346 to 653,660
GFF2931
GFF2932 - hypothetical protein, at 653,770 to 653,967
GFF2932
GFF2933 - Glutamine synthetase, at 654,496 to 655,530
GFF2933
Position (kb) 653
654 Strain fitness (log2 ratio) -1
0
1
2 at 652.801 kb on + strand, within GFF2930 at 652.802 kb on - strand, within GFF2930 at 652.858 kb on + strand, within GFF2930 at 652.912 kb on + strand, within GFF2930 at 653.068 kb on + strand at 653.069 kb on - strand at 653.071 kb on + strand at 653.072 kb on - strand at 653.285 kb on - strand at 653.359 kb on + strand at 653.359 kb on + strand at 653.359 kb on + strand at 653.390 kb on - strand, within GFF2931 at 653.390 kb on - strand, within GFF2931 at 653.390 kb on - strand, within GFF2931 at 653.931 kb on - strand, within GFF2932 at 654.043 kb on + strand at 654.044 kb on - strand at 654.044 kb on - strand at 654.044 kb on - strand at 654.353 kb on + strand at 654.382 kb on + strand at 654.383 kb on - strand at 654.386 kb on + strand at 654.387 kb on - strand at 654.387 kb on - strand at 654.536 kb on - strand at 654.581 kb on - strand at 654.581 kb on - strand at 654.691 kb on + strand, within GFF2933 at 654.732 kb on - strand, within GFF2933 at 654.830 kb on - strand, within GFF2933 at 654.839 kb on - strand, within GFF2933 at 654.839 kb on - strand, within GFF2933 at 654.899 kb on - strand, within GFF2933 at 654.901 kb on + strand, within GFF2933 at 654.901 kb on + strand, within GFF2933 at 654.902 kb on - strand, within GFF2933 at 654.902 kb on - strand, within GFF2933 at 654.903 kb on + strand, within GFF2933 at 654.903 kb on + strand, within GFF2933
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 652,801 + GFF2930 0.73 -0.0 652,802 - GFF2930 0.73 -0.3 652,858 + GFF2930 0.77 -0.5 652,912 + GFF2930 0.81 +0.5 653,068 + -0.3 653,069 - +0.5 653,071 + +0.5 653,072 - +0.1 653,285 - +1.5 653,359 + -0.1 653,359 + +0.3 653,359 + +0.2 653,390 - GFF2931 0.14 +0.6 653,390 - GFF2931 0.14 +0.6 653,390 - GFF2931 0.14 +0.2 653,931 - GFF2932 0.81 -0.2 654,043 + -0.6 654,044 - +2.0 654,044 - -0.1 654,044 - +1.2 654,353 + +0.5 654,382 + +0.0 654,383 - -0.2 654,386 + -1.0 654,387 - +0.4 654,387 - -0.1 654,536 - -0.0 654,581 - -0.3 654,581 - -0.1 654,691 + GFF2933 0.19 -0.8 654,732 - GFF2933 0.23 -0.8 654,830 - GFF2933 0.32 -0.2 654,839 - GFF2933 0.33 -0.6 654,839 - GFF2933 0.33 -0.7 654,899 - GFF2933 0.39 -0.3 654,901 + GFF2933 0.39 +0.2 654,901 + GFF2933 0.39 -0.3 654,902 - GFF2933 0.39 -1.1 654,902 - GFF2933 0.39 -0.5 654,903 + GFF2933 0.39 -0.2 654,903 + GFF2933 0.39 -0.1
Or see this region's nucleotide sequence