Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2722 and GFF2723 are separated by 341 nucleotides GFF2723 and GFF2724 are separated by 59 nucleotides
GFF2722 - hypothetical protein, at 415,580 to 416,239
GFF2722
GFF2723 - D-galactarolactone cycloisomerase, at 416,581 to 417,684
GFF2723
GFF2724 - Putrescine-binding periplasmic protein, at 417,744 to 418,820
GFF2724
Position (kb) 416
417
418 Strain fitness (log2 ratio) -2
-1
0
1
2 at 415.804 kb on + strand, within GFF2722 at 415.804 kb on + strand, within GFF2722 at 415.804 kb on + strand, within GFF2722 at 415.805 kb on - strand, within GFF2722 at 415.890 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.974 kb on + strand, within GFF2722 at 415.975 kb on - strand, within GFF2722 at 415.975 kb on - strand, within GFF2722 at 415.975 kb on - strand, within GFF2722 at 415.975 kb on - strand, within GFF2722 at 416.322 kb on - strand at 416.340 kb on + strand at 416.341 kb on - strand at 416.341 kb on - strand at 416.388 kb on + strand at 416.389 kb on - strand at 416.486 kb on + strand at 416.558 kb on + strand at 416.807 kb on + strand, within GFF2723 at 416.878 kb on + strand, within GFF2723 at 416.882 kb on + strand, within GFF2723 at 416.927 kb on - strand, within GFF2723 at 416.968 kb on + strand, within GFF2723 at 416.968 kb on + strand, within GFF2723 at 416.969 kb on - strand, within GFF2723 at 416.969 kb on - strand, within GFF2723 at 417.120 kb on + strand, within GFF2723 at 417.606 kb on + strand at 417.607 kb on - strand at 417.648 kb on + strand at 417.752 kb on - strand at 417.755 kb on + strand at 417.756 kb on - strand at 417.898 kb on - strand, within GFF2724 at 417.898 kb on - strand, within GFF2724 at 417.956 kb on + strand, within GFF2724 at 417.957 kb on - strand, within GFF2724 at 417.957 kb on - strand, within GFF2724 at 417.960 kb on + strand, within GFF2724 at 417.960 kb on + strand, within GFF2724 at 417.961 kb on - strand, within GFF2724 at 417.961 kb on - strand, within GFF2724 at 417.961 kb on - strand, within GFF2724 at 418.299 kb on + strand, within GFF2724 at 418.413 kb on + strand, within GFF2724 at 418.414 kb on - strand, within GFF2724 at 418.414 kb on - strand, within GFF2724 at 418.414 kb on - strand, within GFF2724 at 418.546 kb on + strand, within GFF2724 at 418.560 kb on + strand, within GFF2724 at 418.611 kb on + strand, within GFF2724 at 418.611 kb on + strand, within GFF2724 at 418.611 kb on + strand, within GFF2724
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 415,804 + GFF2722 0.34 +0.2 415,804 + GFF2722 0.34 -0.3 415,804 + GFF2722 0.34 -1.9 415,805 - GFF2722 0.34 -0.2 415,890 + GFF2722 0.47 -0.7 415,974 + GFF2722 0.60 +1.3 415,974 + GFF2722 0.60 -1.2 415,974 + GFF2722 0.60 +0.4 415,974 + GFF2722 0.60 -0.3 415,974 + GFF2722 0.60 -0.6 415,974 + GFF2722 0.60 -1.2 415,974 + GFF2722 0.60 -0.7 415,974 + GFF2722 0.60 -0.4 415,974 + GFF2722 0.60 +0.3 415,974 + GFF2722 0.60 -0.2 415,975 - GFF2722 0.60 -0.5 415,975 - GFF2722 0.60 -1.3 415,975 - GFF2722 0.60 -0.7 415,975 - GFF2722 0.60 -0.6 416,322 - -0.3 416,340 + -1.1 416,341 - -0.2 416,341 - -2.2 416,388 + +0.1 416,389 - -1.3 416,486 + +0.5 416,558 + -0.0 416,807 + GFF2723 0.20 -0.4 416,878 + GFF2723 0.27 +0.6 416,882 + GFF2723 0.27 -2.6 416,927 - GFF2723 0.31 -1.0 416,968 + GFF2723 0.35 -0.5 416,968 + GFF2723 0.35 -0.4 416,969 - GFF2723 0.35 -0.0 416,969 - GFF2723 0.35 +0.9 417,120 + GFF2723 0.49 -0.3 417,606 + -0.7 417,607 - -2.4 417,648 + -0.2 417,752 - -0.9 417,755 + -0.6 417,756 - -0.1 417,898 - GFF2724 0.14 -0.1 417,898 - GFF2724 0.14 +0.1 417,956 + GFF2724 0.20 +0.2 417,957 - GFF2724 0.20 -0.4 417,957 - GFF2724 0.20 -0.7 417,960 + GFF2724 0.20 +0.1 417,960 + GFF2724 0.20 -0.6 417,961 - GFF2724 0.20 -0.1 417,961 - GFF2724 0.20 -0.7 417,961 - GFF2724 0.20 -1.2 418,299 + GFF2724 0.52 -0.3 418,413 + GFF2724 0.62 -0.3 418,414 - GFF2724 0.62 +0.4 418,414 - GFF2724 0.62 -0.8 418,414 - GFF2724 0.62 +0.8 418,546 + GFF2724 0.74 +1.8 418,560 + GFF2724 0.76 +0.7 418,611 + GFF2724 0.81 +0.2 418,611 + GFF2724 0.81 +0.9 418,611 + GFF2724 0.81 -0.8
Or see this region's nucleotide sequence