Experiment: Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF267 and GFF268 are separated by 159 nucleotides GFF268 and GFF269 are separated by 59 nucleotides
GFF267 - (R)-citramalate synthase, at 281,638 to 283,251
GFF267
GFF268 - hypothetical protein, at 283,411 to 283,857
GFF268
GFF269 - Acetyl-CoA:oxalate CoA-transferase, at 283,917 to 285,092
GFF269
Position (kb) 283
284 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 282.424 kb on + strand, within GFF267 at 282.425 kb on - strand, within GFF267 at 282.442 kb on - strand, within GFF267 at 282.535 kb on + strand, within GFF267 at 282.535 kb on + strand, within GFF267 at 282.536 kb on - strand, within GFF267 at 282.536 kb on - strand, within GFF267 at 282.607 kb on + strand, within GFF267 at 282.607 kb on + strand, within GFF267 at 282.782 kb on - strand, within GFF267 at 282.787 kb on + strand, within GFF267 at 282.787 kb on + strand, within GFF267 at 282.788 kb on - strand, within GFF267 at 282.788 kb on - strand, within GFF267 at 282.893 kb on - strand, within GFF267 at 283.033 kb on + strand, within GFF267 at 283.034 kb on - strand, within GFF267 at 283.069 kb on + strand, within GFF267 at 283.069 kb on + strand, within GFF267 at 283.070 kb on - strand, within GFF267 at 283.070 kb on - strand, within GFF267 at 283.383 kb on - strand at 283.414 kb on + strand at 283.639 kb on + strand, within GFF268 at 283.639 kb on + strand, within GFF268 at 283.639 kb on + strand, within GFF268 at 283.639 kb on + strand, within GFF268 at 283.640 kb on - strand, within GFF268 at 283.640 kb on - strand, within GFF268 at 283.640 kb on - strand, within GFF268 at 283.640 kb on - strand, within GFF268 at 283.640 kb on - strand, within GFF268 at 283.681 kb on + strand, within GFF268 at 283.699 kb on + strand, within GFF268 at 283.700 kb on - strand, within GFF268 at 283.738 kb on + strand, within GFF268 at 283.738 kb on + strand, within GFF268 at 283.739 kb on - strand, within GFF268 at 284.257 kb on + strand, within GFF269 at 284.257 kb on + strand, within GFF269 at 284.431 kb on + strand, within GFF269 at 284.431 kb on + strand, within GFF269 at 284.431 kb on + strand, within GFF269 at 284.431 kb on + strand, within GFF269 at 284.431 kb on + strand, within GFF269 at 284.432 kb on - strand, within GFF269 at 284.432 kb on - strand, within GFF269 at 284.432 kb on - strand, within GFF269 at 284.432 kb on - strand, within GFF269 at 284.432 kb on - strand, within GFF269 at 284.432 kb on - strand, within GFF269 at 284.432 kb on - strand, within GFF269 at 284.551 kb on + strand, within GFF269 at 284.551 kb on + strand, within GFF269 at 284.659 kb on + strand, within GFF269 at 284.659 kb on + strand, within GFF269 at 284.659 kb on + strand, within GFF269 at 284.659 kb on + strand, within GFF269 at 284.749 kb on + strand, within GFF269
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol (C) remove 282,424 + GFF267 0.49 -2.1 282,425 - GFF267 0.49 -2.4 282,442 - GFF267 0.50 -1.4 282,535 + GFF267 0.56 -3.7 282,535 + GFF267 0.56 -2.9 282,536 - GFF267 0.56 -2.5 282,536 - GFF267 0.56 -2.0 282,607 + GFF267 0.60 -2.4 282,607 + GFF267 0.60 -2.0 282,782 - GFF267 0.71 -1.7 282,787 + GFF267 0.71 -2.9 282,787 + GFF267 0.71 -2.4 282,788 - GFF267 0.71 -2.1 282,788 - GFF267 0.71 -1.8 282,893 - GFF267 0.78 -2.7 283,033 + GFF267 0.86 -0.8 283,034 - GFF267 0.86 -3.4 283,069 + GFF267 0.89 -4.2 283,069 + GFF267 0.89 -1.4 283,070 - GFF267 0.89 -1.3 283,070 - GFF267 0.89 -1.0 283,383 - -0.5 283,414 + +0.1 283,639 + GFF268 0.51 -0.4 283,639 + GFF268 0.51 -0.5 283,639 + GFF268 0.51 +0.2 283,639 + GFF268 0.51 -1.4 283,640 - GFF268 0.51 +0.2 283,640 - GFF268 0.51 +0.7 283,640 - GFF268 0.51 +0.6 283,640 - GFF268 0.51 +0.5 283,640 - GFF268 0.51 +0.6 283,681 + GFF268 0.60 +1.0 283,699 + GFF268 0.64 +1.0 283,700 - GFF268 0.65 +0.2 283,738 + GFF268 0.73 -0.2 283,738 + GFF268 0.73 +0.9 283,739 - GFF268 0.73 +0.8 284,257 + GFF269 0.29 +0.5 284,257 + GFF269 0.29 -0.4 284,431 + GFF269 0.44 +0.1 284,431 + GFF269 0.44 -0.2 284,431 + GFF269 0.44 +0.2 284,431 + GFF269 0.44 +0.4 284,431 + GFF269 0.44 -0.6 284,432 - GFF269 0.44 -0.2 284,432 - GFF269 0.44 -0.1 284,432 - GFF269 0.44 +2.0 284,432 - GFF269 0.44 +0.9 284,432 - GFF269 0.44 -0.6 284,432 - GFF269 0.44 -0.2 284,432 - GFF269 0.44 +0.6 284,551 + GFF269 0.54 +0.6 284,551 + GFF269 0.54 -0.2 284,659 + GFF269 0.63 +0.6 284,659 + GFF269 0.63 -2.2 284,659 + GFF269 0.63 -2.2 284,659 + GFF269 0.63 -1.8 284,749 + GFF269 0.71 -0.4
Or see this region's nucleotide sequence